hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-10122715/chunk_1/iprscan-20080502-10122715.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0687 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00780.12.ls CNH domain 369.7 4.1e-108 1 PF00780.12.fs CNH domain 368.0 1.4e-107 1 PF00069.15.fs Protein kinase domain 255.8 8.3e-74 1 PF00069.15.ls Protein kinase domain 242.8 6.8e-70 1 PF07714.7.fs Protein tyrosine kinase 98.1 2.2e-28 1 PF07714.7.ls Protein tyrosine kinase 75.2 2e-19 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.ls 1/1 1 252 [. 1 287 [] 242.8 6.8e-70 PF00069.15.fs 1/1 1 252 [. 14 287 .] 255.8 8.3e-74 PF07714.7.ls 1/1 1 252 [. 1 272 [] 75.2 2e-19 PF07714.7.fs 1/1 2 208 .. 15 230 .. 98.1 2.2e-28 PF00780.12.fs 1/1 862 1153 .. 1 363 [] 368.0 1.4e-107 PF00780.12.ls 1/1 862 1153 .. 1 363 [] 369.7 4.1e-108 Alignments of top-scoring domains: PF00069.15.ls: domain 1 of 1, from 1 to 252: score 242.8, E = 6.8e-70 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr +Vyk++h++tg++ A+K++++ ++++++ k KIAA0687 1 -------------QVYKGRHVKTGQLAAIKVMDVTEDEEEEIKL--- 31 lsEiqilkrL.sHpNIvrlidvfed......kdhlylVlEycegGLrvld Ei +lk+ ++H NI +++++f +++++++d l+lV+E+c+ G + KIAA0687 32 --EINMLKKYsHHRNIATYYGAFIKksppghDDQLWLVMEFCGAG----S 75 LfdylsetrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNI d+++ ++++l ed + i ++ilrgl++LH + +iHRD+K +N+ KIAA0687 76 ITDLVK-NTKGNTL--KEDWIAYISREILRGLAHLHIHHVIHRDIKGQNV 122 LldnngvvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvll... Ll +n +v K+ DFG++++l + ++ +tf GTp++mAPEv+ ++ KIAA0687 123 LLTENAEV----KLVDFGVSAQL-DrTVGrRNTFIGTPYWMAPEVIAcde 167 .ggngygtkvDvWSlGvilyelltGkpPFsgevqds.ldqlqlirkilgp + + y++++D WS+G++ +e++ G pP ++ ++ + l+li ++ +p KIAA0687 168 nPDATYDYRSDLWSCGITAIEMAEGAPPLCDM---HpMRALFLIPRNPPP 214 plefdspewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilq +l++ + s+ + ++i++cL k+ +R++ e++l+ KIAA0687 215 RLKSKKW----------------SKKFFSFIEGCLVKNYMQRPSTEQLLK 248 HPwf<-* HP++ KIAA0687 249 HPFI 252 PF00069.15.fs: domain 1 of 1, from 1 to 252: score 255.8, E = 8.3e-74 *->tVykakhkgtgkiVAvKiikkrkekskkdktarrlsEiqilkrL.sH +Vyk++h++tg++ A+K++++ ++++++ k Ei +lk+ ++H KIAA0687 1 QVYKGRHVKTGQLAAIKVMDVTEDEEEEIKL-----EINMLKKYsHH 42 pNIvrlidvfed......kdhlylVlEycegGLrvldLfdylsetrrkgp NI +++++f +++++++d l+lV+E+c+ G + d+++ ++++ KIAA0687 43 RNIATYYGAFIKksppghDDQLWLVMEFCGAG----SITDLVK-NTKGNT 87 llfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngvvdaflK l ed + i ++ilrgl++LH + +iHRD+K +N+Ll +n +v K KIAA0687 88 L--KEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEV----K 131 iaDFGlAkklst.sss.lttfvGTpwYmAPEvll....ggngygtkvDvW + DFG++++l + ++ +tf GTp++mAPEv+ +++ + y++++D W KIAA0687 132 LVDFGVSAQL-DrTVGrRNTFIGTPYWMAPEVIAcdenPDATYDYRSDLW 180 SlGvilyelltGkpPFsgevqds.ldqlqlirkilgpplefdspewdsis S+G++ +e++ G pP ++ ++ + l+li ++ +p+l++ + KIAA0687 181 SCGITAIEMAEGAPPLCDM---HpMRALFLIPRNPPPRLKSKKW------ 221 rsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* s+ + ++i++cL k+ +R++ e++l+HP++ KIAA0687 222 ----------SKKFFSFIEGCLVKNYMQRPSTEQLLKHPFI 252 PF07714.7.ls: domain 1 of 1, from 1 to 252: score 75.2, E = 2e-19 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie VykG+ +t++ A+K++ + +e+e KIAA0687 1 -------------QVYKGRHV----KTGQLAAIKVM---DVTEDE-- 25 redFlrEAsiMkklGdHpNiVrLlGvctkegePggpg.lyiVtEymegGd e+ E++++kk+ +H Ni ++G+ +k + Pg +++l++V+E++ G+ KIAA0687 26 EEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDqLWLVMEFCGAGS 75 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV d ++ g+ L+ ++ ++++i +G+++L+ ++ +HRD+ N+L+ KIAA0687 76 ITDLVKNT-KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLL 124 senlvVKIsDFGLaRdiynddyYvrkkgggk.lPvkWmAPEslkygk... +en VK DFG + ++ d + + ++ WmAPE+++ ++++ KIAA0687 125 TENAEVKLVDFGVSAQL---DRT-VGRRNTFiGTPYWMAPEVIACDEnpd 170 ..FtskSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLpr. ++ SD WS G++ E+ G++P +m + + l l+ ++ + KIAA0687 171 atYDYRSDLWSCGITAIEMAE-GAPP-LCDMHPMRALFLI-PRNPPPRLk 217 PenCPdelYdlMlqCWaedPedRPtFsel..veeL<-* ++ +++ + + C ++ +RP+ ++l ++ ++ KIAA0687 218 SKKWSKKFFSFIEGCLVKNYMQRPSTEQLlkHPFI 252 PF07714.7.fs: domain 1 of 1, from 2 to 208: score 98.1, E = 2.2e-28 *->VykGtlkgsgdgteikVAVKtLkeigaseeeieredFlrEAsiMkkl VykG+ +t++ A+K++ + +e+e e+ E++++kk+ KIAA0687 2 VYKGRHV----KTGQLAAIKVM---DVTEDE--EEEIKLEINMLKKY 39 GdHpNiVrLlGvctkegePggpg.lyiVtEymegGdLldfLrkhregrpL +H Ni ++G+ +k + Pg +++l++V+E++ G+ d ++ g+ L KIAA0687 40 SHHRNIATYYGAFIKKSPPGHDDqLWLVMEFCGAGSITDLVKNT-KGNTL 88 tlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLVsenlvVKIsDFGLa + ++ ++++i +G+++L+ ++ +HRD+ N+L++en VK DFG + KIAA0687 89 KEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVS 138 RdiynddyYvrkkgggk.lPvkWmAPEslkygk.....FtskSDVWSFGV ++ d + + ++ WmAPE+++ ++++ ++ SD WS G+ KIAA0687 139 AQL---DRT-VGRRNTFiGTPYWMAPEVIACDEnpdatYDYRSDLWSCGI 184 lLWEiftlGeqPFYpgmsneevlell<-* + E+ G++P +m + + l l+ KIAA0687 185 TAIEMAE-GAPP-LCDMHPMRALFLI 208 PF00780.12.fs: domain 1 of 1, from 862 to 1153: score 368.0, E = 1.4e-107 *->kvnwihaitggqnLLvGTeeGLYvlnrsdqhdaflgklvkiigrrsv ++++ +a ++g+nLLvGTe+GL++l+rs+q gk++++i+rr++ KIAA0687 862 NSEILCAALWGVNLLVGTESGLMLLDRSGQ-----GKVYPLINRRRF 903 tqlevieelnlLllLseGKkrhLylhpLsaLetekkdtaqgsskilrlpe +q++v+e+ln+L+++s GKk +L++++Ls+L ++ KIAA0687 904 QQMDVLEGLNVLVTIS-GKKDKLRVYYLSWL-----------------RN 935 ktlarrfavskKipetkghCklccvgfiaegycggtkFLcvvAlksddls k+l+++++v kK ++t+++++++cv+ + + y+++ kFL++ Alks KIAA0687 936 KILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERI-KFLVI-ALKS---- 979 tsillyeWPlkeyklpnnyekllkfinrkktrfrkpkeldvpepvqsief s+++y+W ++kp++++++++++ + KIAA0687 980 -SVEVYAW------------------------APKPYHKFMAFKSFGELV 1004 lkpslcvGcskgfeillvlfgss.gfhsldleGqseaaldlllPsndlsl +kp+l++++++ +++l+v++gs+ gfh++d++ s++++d++lP + +++ KIAA0687 1005 HKPLLVDLTVEEGQRLKVIYGSCaGFHAVDVD--SGSVYDIYLPTHIQCS 1052 efakklsQsvdalrakevvsaiqidrdeyLLCfsefgvfVNlqGrrsrkk + +++ ++++++ d++e+L+C++++gv+VN++Gr +++ KIAA0687 1053 I------------KPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDV 1090 kdiselmWegaPesfayslypyllafhdngieIrsletgeltqeladrvq +l+W ++P+s+ay+++++ +++++++ieIrs+etg+l+++++++ + KIAA0687 1091 ----VLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRA 1136 tillnkirllvslrsls<-* + l+++++++++++++s KIAA0687 1137 QRLKFLCERNDKVFFAS 1153 PF00780.12.ls: domain 1 of 1, from 862 to 1153: score 369.7, E = 4.1e-108 *->kvnwihaitggqnLLvGTeeGLYvlnrsdqhdaflgklvkiigrrsv ++++ +a ++g+nLLvGTe+GL++l+rs+q gk++++i+rr++ KIAA0687 862 NSEILCAALWGVNLLVGTESGLMLLDRSGQ-----GKVYPLINRRRF 903 tqlevieelnlLllLseGKkrhLylhpLsaLetekkdtaqgsskilrlpe +q++v+e+ln+L+++s GKk +L++++Ls+L ++ KIAA0687 904 QQMDVLEGLNVLVTIS-GKKDKLRVYYLSWL-----------------RN 935 ktlarrfavskKipetkghCklccvgfiaegycggtkFLcvvAlksddls k+l+++++v kK ++t+++++++cv+ + + y+++ kFL++ Alks KIAA0687 936 KILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERI-KFLVI-ALKS---- 979 tsillyeWPlkeyklpnnyekllkfinrkktrfrkpkeldvpepvqsief s+++y+W ++kp++++++++++ + KIAA0687 980 -SVEVYAW------------------------APKPYHKFMAFKSFGELV 1004 lkpslcvGcskgfeillvlfgss.gfhsldleGqseaaldlllPsndlsl +kp+l++++++ +++l+v++gs+ gfh++d++ s++++d++lP + +++ KIAA0687 1005 HKPLLVDLTVEEGQRLKVIYGSCaGFHAVDVD--SGSVYDIYLPTHIQCS 1052 efakklsQsvdalrakevvsaiqidrdeyLLCfsefgvfVNlqGrrsrkk + +++ ++++++ d++e+L+C++++gv+VN++Gr +++ KIAA0687 1053 I------------KPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDV 1090 kdiselmWegaPesfayslypyllafhdngieIrsletgeltqeladrvq +l+W ++P+s+ay+++++ +++++++ieIrs+etg+l+++++++ + KIAA0687 1091 ----VLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRA 1136 tillnkirllvslrsls<-* + l+++++++++++++s KIAA0687 1137 QRLKFLCERNDKVFFAS 1153 //