hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09565709/chunk_1/iprscan-20080502-09565709.nocrc
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Query sequence: KIAA0678
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00271                                                  79.2    4.9e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00271    1/1    1314  1372 ..     1    72 []    79.2  4.9e-19

Alignments of top-scoring domains:
SM00271: domain 1 of 1, from 1314 to 1372: score 79.2, E = 4.9e-19
                   *->tdyYeiLGvskd...AsddeIKKAYRkLAlkyHPDKnpgdpelseek
                       d+Ye+L++++++++ +++ I+KAY +LA kyHPDKnp         
    KIAA0678  1314    DDAYEVLNLPQGqgpHDESKIRKAYFRLAQKYHPDKNP--------- 1351 

                   lpeeekeeAeekFkeIneAYevLsDpek<-*
                          e  ++F ++n+AYe L+ +     
    KIAA0678  1352 -------EGRDMFEKVNKAYEFLCTKSA    1372 

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