hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09263515/chunk_1/iprscan-20080502-09263515.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0660
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                  62.1    7.2e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/1     340   413 ..     1   121 []    62.1  7.2e-14

Alignments of top-scoring domains:
SM00360: domain 1 of 1, from 340 to 413: score 62.1, E = 7.2e-14
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                       lfVgNL  p d++e +L+e+F                fG+vv+ ri
    KIAA0660   340    QLFVGNL--PHDIDENELKEFF--------------MSFGNVVELRI 370  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                    ++ +                      Gk  +f+FV F+d e +++   +
    KIAA0660   371 NTKGV---------------------GGKLPNFGFVVFDDSEPVQRI--L 397  

                   ealnaskGkeledgGrptlglrVe<-*
                    a       ++ +g  +   l+Ve   
    KIAA0660   398 IAKP----IMF-RGEVR---LNVE    413  

//