# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hk01902.fasta.nr -Q ../query/KIAA0660.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0660, 490 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7811947 sequences Expectation_n fit: rho(ln(x))= 6.3955+/-0.000208; mu= 7.0255+/- 0.012 mean_var=144.5293+/-27.395, 0's: 39 Z-trim: 84 B-trim: 0 in 0/67 Lambda= 0.106683 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|74216966|dbj|BAE26595.1| unnamed protein produc ( 553) 3321 522.7 9.4e-146 gi|74139958|dbj|BAE31814.1| unnamed protein produc ( 550) 3316 522.0 1.6e-145 gi|55728996|emb|CAH91236.1| hypothetical protein [ ( 482) 3298 519.1 9.9e-145 gi|5805295|gb|AAD51932.1|AF145284_1 RNA-binding pr ( 482) 3296 518.8 1.2e-144 gi|109074462|ref|XP_001100686.1| PREDICTED: simila ( 482) 3296 518.8 1.2e-144 gi|194209060|ref|XP_001489923.2| PREDICTED: GTPase ( 482) 3293 518.4 1.7e-144 gi|74001638|ref|XP_848490.1| PREDICTED: similar to ( 482) 3280 516.3 6.8e-144 gi|74001634|ref|XP_856147.1| PREDICTED: similar to ( 483) 3268 514.5 2.4e-143 gi|14916570|sp|P97379.2|G3BP2_MOUSE RecName: Full= ( 482) 3266 514.2 3e-143 gi|149033807|gb|EDL88603.1| similar to RNA-binding ( 482) 3252 512.0 1.3e-142 gi|74001636|ref|XP_856193.1| PREDICTED: similar to ( 483) 3250 511.7 1.7e-142 gi|74001632|ref|XP_856112.1| PREDICTED: similar to ( 481) 3227 508.2 1.9e-141 gi|126330674|ref|XP_001364927.1| PREDICTED: simila ( 482) 3203 504.5 2.5e-140 gi|118090133|ref|XP_420536.2| PREDICTED: similar t ( 482) 3096 488.0 2.3e-135 gi|39795768|gb|AAH64172.1| GTPase activating prote ( 484) 2813 444.5 2.9e-122 gi|49903639|gb|AAH76729.1| MGC81268 protein [Xenop ( 483) 2812 444.3 3.3e-122 gi|67969841|dbj|BAE01268.1| unnamed protein produc ( 424) 2219 353.0 8.9e-95 gi|57085257|ref|XP_536460.1| PREDICTED: similar to ( 465) 1917 306.6 9.3e-81 gi|149726164|ref|XP_001503695.1| PREDICTED: simila ( 465) 1917 306.6 9.3e-81 gi|149412590|ref|XP_001508871.1| PREDICTED: hypoth ( 461) 1915 306.2 1.1e-80 gi|122063478|sp|Q32LC7.1|G3BP1_BOVIN RecName: Full ( 465) 1910 305.5 2e-80 gi|109488113|ref|XP_340803.2| PREDICTED: similar t ( 527) 1884 301.5 3.4e-79 gi|14916571|sp|P97855.1|G3BP1_MOUSE RecName: Full= ( 465) 1877 300.4 6.7e-79 gi|53127125|emb|CAG31012.1| hypothetical protein [ ( 472) 1684 270.7 5.9e-70 gi|3098601|gb|AAC15705.1| Ras-GAP SH3 binding prot ( 449) 1646 264.8 3.3e-68 gi|158256976|dbj|BAF84461.1| unnamed protein produ ( 449) 1646 264.8 3.3e-68 gi|4007412|gb|AAC95292.1| ras-GAP/RNA binding prot ( 449) 1646 264.8 3.3e-68 gi|194209058|ref|XP_001489896.2| PREDICTED: GTPase ( 449) 1643 264.4 4.5e-68 gi|119626153|gb|EAX05748.1| Ras-GTPase activating ( 264) 1636 263.0 6.6e-68 gi|86823966|gb|AAI05568.1| GTPase activating prote ( 449) 1630 262.4 1.8e-67 gi|74001626|ref|XP_855995.1| PREDICTED: similar to ( 449) 1629 262.2 2e-67 gi|73953621|ref|XP_867372.1| PREDICTED: similar to ( 473) 1624 261.5 3.6e-67 gi|149480514|ref|XP_001520721.1| PREDICTED: simila ( 241) 1616 259.9 5.3e-67 gi|74207300|dbj|BAE30836.1| unnamed protein produc ( 448) 1612 259.6 1.2e-66 gi|26345096|dbj|BAC36197.1| unnamed protein produc ( 449) 1612 259.6 1.2e-66 gi|1698657|gb|AAC53553.1| ras-GTPase-activating pr ( 482) 1612 259.6 1.3e-66 gi|119582065|gb|EAW61661.1| Ras-GTPase-activating ( 473) 1607 258.8 2.2e-66 gi|119582066|gb|EAW61662.1| Ras-GTPase-activating ( 505) 1607 258.9 2.3e-66 gi|50927029|gb|AAH79225.1| GTPase activating prote ( 449) 1606 258.7 2.3e-66 gi|109079427|ref|XP_001110695.1| PREDICTED: Ras-GT ( 466) 1606 258.7 2.4e-66 gi|55728352|emb|CAH90920.1| hypothetical protein [ ( 466) 1603 258.2 3.3e-66 gi|75070772|sp|Q5RB87.1|G3BP1_PONAB RecName: Full= ( 466) 1603 258.2 3.3e-66 gi|114602975|ref|XP_001168984.1| PREDICTED: Ras-GT ( 466) 1602 258.1 3.7e-66 gi|14916572|sp|Q13283.1|G3BP1_HUMAN RecName: Full= ( 466) 1600 257.8 4.5e-66 gi|54695634|gb|AAV38189.1| Ras-GTPase-activating p ( 467) 1600 257.8 4.6e-66 gi|126290635|ref|XP_001369530.1| PREDICTED: simila ( 466) 1597 257.3 6.3e-66 gi|49168554|emb|CAG38772.1| G3BP [Homo sapiens] ( 466) 1594 256.8 8.6e-66 gi|80478622|gb|AAI08279.1| GTPase activating prote ( 466) 1593 256.7 9.6e-66 gi|62896771|dbj|BAD96326.1| Ras-GTPase-activating ( 466) 1589 256.1 1.5e-65 gi|126330676|ref|XP_001365000.1| PREDICTED: simila ( 449) 1577 254.2 5.2e-65 >>gi|74216966|dbj|BAE26595.1| unnamed protein product [M (553 aa) initn: 3321 init1: 3321 opt: 3321 Z-score: 2773.0 bits: 522.7 E(): 9.4e-146 Smith-Waterman score: 3321; 98.367% identity (100.000% similar) in 490 aa overlap (1-490:64-553) 10 20 30 KIAA06 HLTLCSKEMVMEKPSPLLVGREFVRQYYTL :::::::::::::::::::::::::::::: gi|742 GCFEGGESAAADPATLLTSARRARRRCWLEHLTLCSKEMVMEKPSPLLVGREFVRQYYTL 40 50 60 70 80 90 40 50 60 70 80 90 KIAA06 LNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNFSECHTKIRHVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNFSECHTKIRHVDA 100 110 120 130 140 150 100 110 120 130 140 150 KIAA06 HATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVHNDMFRYEDEVFGDSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 HATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVHNDMFRYEDEVFGDSE 160 170 180 190 200 210 160 170 180 190 200 210 KIAA06 PELDEESEDEVEEEQEERQPSPEPVQENANSGYYEAHPVTNGIEEPLEESSHEPEPEPES ::::::::::::::::.::::::::::::::.::.::::::::::::::::::::::::: gi|742 PELDEESEDEVEEEQEDRQPSPEPVQENANSAYYDAHPVTNGIEEPLEESSHEPEPEPES 220 230 240 250 260 270 220 230 240 250 260 270 KIAA06 ETKTEELKPQVEEKNLEELEEKSTTPPPAEPVSLPQEPPKAFSWASVTSKNLPPSGTVSS ::::::::::::::.::::::::.:::::::.:::::::::::::::::::::::::::: gi|742 ETKTEELKPQVEEKHLEELEEKSATPPPAEPASLPQEPPKAFSWASVTSKNLPPSGTVSS 280 290 300 310 320 330 280 290 300 310 320 330 KIAA06 SGIPPHVKAPVSQPRVEAKPEVQSQPPRVREQRPRERPGFPPRGPRPGRGDMEQNDSDNR ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|742 SGIPPHVKAPVSQPRVDAKPEVQSQPPRVREQRPRERPGFPPRGPRPGRGDMEQNDSDNR 340 350 360 370 380 390 340 350 360 370 380 390 KIAA06 RIIRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 RIIRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDS 400 410 420 430 440 450 400 410 420 430 440 450 KIAA06 EPVQRILIAKPIMFRGEVRLNVEEKKTRAARERETRGGGDDRRDIRRNDRGPGGPRGIVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EPVQRILIAKPIMFRGEVRLNVEEKKTRAARERETRGGGDDRRDIRRNDRGPGGPRGIVG 460 470 480 490 500 510 460 470 480 490 KIAA06 GGMMRDRDGRGPPPRGGMAQKLGSGRGTGQMEGRFTGQRR ::::::::::::::::::.::::::::::::::::::::: gi|742 GGMMRDRDGRGPPPRGGMTQKLGSGRGTGQMEGRFTGQRR 520 530 540 550 >>gi|74139958|dbj|BAE31814.1| unnamed protein product [M (550 aa) initn: 3316 init1: 3316 opt: 3316 Z-score: 2768.9 bits: 522.0 E(): 1.6e-145 Smith-Waterman score: 3316; 98.163% identity (100.000% similar) in 490 aa overlap (1-490:61-550) 10 20 30 KIAA06 HLTLCSKEMVMEKPSPLLVGREFVRQYYTL :::::::::::::::::::::::::::::: gi|741 GVGAAETLFSPAAYASKSACVRAEPSLSCKHLTLCSKEMVMEKPSPLLVGREFVRQYYTL 40 50 60 70 80 90 40 50 60 70 80 90 KIAA06 LNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNFSECHTKIRHVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNFSECHTKIRHVDA 100 110 120 130 140 150 100 110 120 130 140 150 KIAA06 HATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVHNDMFRYEDEVFGDSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 HATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVHNDMFRYEDEVFGDSE 160 170 180 190 200 210 160 170 180 190 200 210 KIAA06 PELDEESEDEVEEEQEERQPSPEPVQENANSGYYEAHPVTNGIEEPLEESSHEPEPEPES ::::::::::::::::.::::::::::::::.::.::::::::::::::::::::::::: gi|741 PELDEESEDEVEEEQEDRQPSPEPVQENANSAYYDAHPVTNGIEEPLEESSHEPEPEPES 220 230 240 250 260 270 220 230 240 250 260 270 KIAA06 ETKTEELKPQVEEKNLEELEEKSTTPPPAEPVSLPQEPPKAFSWASVTSKNLPPSGTVSS ::::::::::::::.::::::::.:::::::.:::::::::::::::::::::::::::: gi|741 ETKTEELKPQVEEKHLEELEEKSATPPPAEPASLPQEPPKAFSWASVTSKNLPPSGTVSS 280 290 300 310 320 330 280 290 300 310 320 330 KIAA06 SGIPPHVKAPVSQPRVEAKPEVQSQPPRVREQRPRERPGFPPRGPRPGRGDMEQNDSDNR ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|741 SGIPPHVKAPVSQPRVDAKPEVQSQPPRVREQRPRERPGFPPRGPRPGRGDMEQNDSDNR 340 350 360 370 380 390 340 350 360 370 380 390 KIAA06 RIIRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RIIRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDS 400 410 420 430 440 450 400 410 420 430 440 450 KIAA06 EPVQRILIAKPIMFRGEVRLNVEEKKTRAARERETRGGGDDRRDIRRNDRGPGGPRGIVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EPVQRILIAKPIMFRGEVRLNVEEKKTRAARERETRGGGDDRRDIRRNDRGPGGPRGIVG 460 470 480 490 500 510 460 470 480 490 KIAA06 GGMMRDRDGRGPPPRGGMAQKLGSGRGTGQMEGRFTGQRR ::::::::::::::::::.::::::::::::::::::.:: gi|741 GGMMRDRDGRGPPPRGGMTQKLGSGRGTGQMEGRFTGERR 520 530 540 550 >>gi|55728996|emb|CAH91236.1| hypothetical protein [Pong (482 aa) initn: 3298 init1: 3298 opt: 3298 Z-score: 2754.6 bits: 519.1 E(): 9.9e-145 Smith-Waterman score: 3298; 99.793% identity (99.793% similar) in 482 aa overlap (9-490:1-482) 10 20 30 40 50 60 KIAA06 HLTLCSKEMVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 MVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ 10 20 30 40 50 70 80 90 100 110 120 KIAA06 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 SGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAE 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 EQRPRERPGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|557 EQRPRERPGFPPRGPRPDRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ 420 430 440 450 460 470 490 KIAA06 MEGRFTGQRR :::::::::: gi|557 MEGRFTGQRR 480 >>gi|5805295|gb|AAD51932.1|AF145284_1 RNA-binding protei (482 aa) initn: 3296 init1: 3296 opt: 3296 Z-score: 2752.9 bits: 518.8 E(): 1.2e-144 Smith-Waterman score: 3296; 99.793% identity (99.793% similar) in 482 aa overlap (9-490:1-482) 10 20 30 40 50 60 KIAA06 HLTLCSKEMVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|580 MVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ 10 20 30 40 50 70 80 90 100 110 120 KIAA06 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|580 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|580 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|580 SGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAE 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|580 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPSHVKAPVSQPRVEAKPEVQSQPPRVR 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 EQRPRERPGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|580 EQRPRERPGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|580 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|580 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ 420 430 440 450 460 470 490 KIAA06 MEGRFTGQRR :::::::::: gi|580 MEGRFTGQRR 480 >>gi|109074462|ref|XP_001100686.1| PREDICTED: similar to (482 aa) initn: 3296 init1: 3296 opt: 3296 Z-score: 2752.9 bits: 518.8 E(): 1.2e-144 Smith-Waterman score: 3296; 99.793% identity (99.793% similar) in 482 aa overlap (9-490:1-482) 10 20 30 40 50 60 KIAA06 HLTLCSKEMVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ 10 20 30 40 50 70 80 90 100 110 120 KIAA06 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAE ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|109 SGYYEAHPVTNGIEEPLEESSHEPEPETESETKTEELKPQVEEKNLEELEEKSTTPPPAE 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 EQRPRERPGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EQRPRERPGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ 420 430 440 450 460 470 490 KIAA06 MEGRFTGQRR :::::::::: gi|109 MEGRFTGQRR 480 >>gi|194209060|ref|XP_001489923.2| PREDICTED: GTPase act (482 aa) initn: 3293 init1: 3293 opt: 3293 Z-score: 2750.4 bits: 518.4 E(): 1.7e-144 Smith-Waterman score: 3293; 99.378% identity (100.000% similar) in 482 aa overlap (9-490:1-482) 10 20 30 40 50 60 KIAA06 HLTLCSKEMVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ 10 20 30 40 50 70 80 90 100 110 120 KIAA06 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAE ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|194 SGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTSPPPAE 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 EQRPRERPGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM :::::::::::::::::::::.:::.:::::::::::::::::::::::::::::::::: gi|194 EQRPRERPGFPPRGPRPGRGDIEQNESDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ 420 430 440 450 460 470 490 KIAA06 MEGRFTGQRR :::::::::: gi|194 MEGRFTGQRR 480 >>gi|74001638|ref|XP_848490.1| PREDICTED: similar to Ras (482 aa) initn: 3280 init1: 3280 opt: 3280 Z-score: 2739.6 bits: 516.3 E(): 6.8e-144 Smith-Waterman score: 3280; 98.755% identity (100.000% similar) in 482 aa overlap (9-490:1-482) 10 20 30 40 50 60 KIAA06 HLTLCSKEMVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 MVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ 10 20 30 40 50 70 80 90 100 110 120 KIAA06 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|740 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAE :::::::::.::::::::::::::::::.:::::::::::::::::::::::::.::::: gi|740 SGYYEAHPVANGIEEPLEESSHEPEPEPDSETKTEELKPQVEEKNLEELEEKSTSPPPAE 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 EQRPRERPGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM :::::::::::::::::::::.:::.:::::::::::::::::::::::::::::::::: gi|740 EQRPRERPGFPPRGPRPGRGDLEQNESDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ 420 430 440 450 460 470 490 KIAA06 MEGRFTGQRR :::::::::: gi|740 MEGRFTGQRR 480 >>gi|74001634|ref|XP_856147.1| PREDICTED: similar to Ras (483 aa) initn: 2099 init1: 2099 opt: 3268 Z-score: 2729.6 bits: 514.5 E(): 2.4e-143 Smith-Waterman score: 3268; 98.551% identity (99.793% similar) in 483 aa overlap (9-490:1-483) 10 20 30 40 50 60 KIAA06 HLTLCSKEMVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 MVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ 10 20 30 40 50 70 80 90 100 110 120 KIAA06 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|740 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAE :::::::::.::::::::::::::::::.:::::::::::::::::::::::::.::::: gi|740 SGYYEAHPVANGIEEPLEESSHEPEPEPDSETKTEELKPQVEEKNLEELEEKSTSPPPAE 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR 240 250 260 270 280 290 310 320 330 340 350 KIAA06 EQRPRERPGFPPRGPRPG-RGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFF :::::::::::::::::: :::.:::.::::::::::::::::::::::::::::::::: gi|740 EQRPRERPGFPPRGPRPGGRGDLEQNESDNRRIIRYPDSHQLFVGNLPHDIDENELKEFF 300 310 320 330 340 350 360 370 380 390 400 410 KIAA06 MSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 MSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRA 360 370 380 390 400 410 420 430 440 450 460 470 KIAA06 ARERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 ARERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTG 420 430 440 450 460 470 480 490 KIAA06 QMEGRFTGQRR ::::::::::: gi|740 QMEGRFTGQRR 480 >>gi|14916570|sp|P97379.2|G3BP2_MOUSE RecName: Full=Ras (482 aa) initn: 3266 init1: 3266 opt: 3266 Z-score: 2728.0 bits: 514.2 E(): 3e-143 Smith-Waterman score: 3266; 98.340% identity (100.000% similar) in 482 aa overlap (9-490:1-482) 10 20 30 40 50 60 KIAA06 HLTLCSKEMVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ 10 20 30 40 50 70 80 90 100 110 120 KIAA06 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEDRQPSPEPVQENAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAE :.::.:::::::::::::::::::::::::::::::::::::::.::::::::.:::::: gi|149 SAYYDAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKHLEELEEKSATPPPAE 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR :.::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 PASLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVDAKPEVQSQPPRVR 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 EQRPRERPGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EQRPRERPGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|149 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMTQKLGSGRGTGQ 420 430 440 450 460 470 490 KIAA06 MEGRFTGQRR :::::::::: gi|149 MEGRFTGQRR 480 >>gi|149033807|gb|EDL88603.1| similar to RNA-binding pro (482 aa) initn: 3252 init1: 3252 opt: 3252 Z-score: 2716.3 bits: 512.0 E(): 1.3e-142 Smith-Waterman score: 3252; 97.925% identity (99.793% similar) in 482 aa overlap (9-490:1-482) 10 20 30 40 50 60 KIAA06 HLTLCSKEMVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQ 10 20 30 40 50 70 80 90 100 110 120 KIAA06 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EAVYGQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA06 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENAN ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 VLAPEGSVPNKFYVHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEDRQPSPEPVQENAN 120 130 140 150 160 170 190 200 210 220 230 240 KIAA06 SGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAE :.::::::::::::::::::::::::::::::::::::::.:::.::::::::.::::.: gi|149 SAYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELKPQAEEKHLEELEEKSATPPPTE 180 190 200 210 220 230 250 260 270 280 290 300 KIAA06 PVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVR :.::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 PASLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVDAKPEVQSQPPRVR 240 250 260 270 280 290 310 320 330 340 350 360 KIAA06 EQRPRERPGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|149 EQRPRERPGFPPRGPRPGRGDTEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFM 300 310 320 330 340 350 370 380 390 400 410 420 KIAA06 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAA 360 370 380 390 400 410 430 440 450 460 470 480 KIAA06 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQ ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|149 RERETRGGGDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMTQKLGSGRGTGQ 420 430 440 450 460 470 490 KIAA06 MEGRFTGQRR :::::::::: gi|149 MEGRFTGQRR 480 490 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 13:02:34 2009 done: Thu Mar 5 13:06:38 2009 Total Scan time: 1473.290 Total Display time: 0.200 Function used was FASTA [version 34.26.5 April 26, 2007]