hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-09162454/chunk_1/iprscan-20080502-09162454.nocrc
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Query sequence: KIAA0655
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00307                                                 428.0     5e-124   1
SM00273                                                 160.9    1.3e-43   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00273    1/1      44   166 ..     1   137 []   160.9  1.3e-43
SM00307    1/1     829  1027 ..     1   207 []   428.0   5e-124

Alignments of top-scoring domains:
SM00273: domain 1 of 1, from 44 to 166: score 160.9, E = 1.3e-43
                   *->sdlevkVrkATnndewgpkgkhlreIlqgTsneklrssfaeimavlw
                       ++++++ kA+n++e+++k+kh+r I++gT++ek  ++f++++ ++ 
    KIAA0655    44    KTQAISISKAINTQEAPVKEKHARRIILGTHHEK--GAFTFWSYAIG 88   

                   rRLndkgknWrvvyKaLillhyLlrnGspfervvlealrnrnrIltLsdf
                    +L ++    ++ +K++++lh++lr+G+  ++v+++++r+r  I+++ d 
    KIAA0655    89 LPLPSS---SILSWKFCHVLHKVLRDGH--PNVLHDCQRYRSNIREIGDL 133  

                   qdkvfndidsrgkDqGaniRtyakyLlelledderlkeer<-*
                   +++        + ++G++++ y k+Ll++++++ ++++++   
    KIAA0655   134 WGH-------LHDRYGQLVNVYTKLLLTKISFHLKHPQFP    166  

SM00307: domain 1 of 1, from 829 to 1027: score 428.0, E = 5e-124
                   *->gveleVdEsILeaAkaItkAiaaLVkAAtnaQrEIVaqGrggaspae
                      gv+leV+E+IL+++++++kAi+ LV+++t++Q+EIV++Grg+a+++e
    KIAA0655   829    GVKLEVNERILNSCTDLMKAIRLLVTTSTSLQKEIVESGRGAATQQE 875  

                   fYkKnsrWTEGLISAAKAVAaAtnvLveaAdgvvqGkgseEeLIVAakeV
                   fY+KnsrWTEGLISA+KAV++++++LveaAd+vv ++g++EeLIV+++e+
    KIAA0655   876 FYAKNSRWTEGLISASKAVGWGATQLVEAADKVVLHTGKYEELIVCSHEI 925  

                   AASTAQLVaASRVKAdkdSqSqAaqdrLeaAskaVtnAtanLVaavksva
                   AASTAQLVaAS+VKA+k+S+   +++rL+++s++V++++an+Va++ks++
    KIAA0655   926 AASTAQLVAASKVKANKHSP---HLSRLQECSRTVNERAANVVASTKSGQ 972  

                   ieddeetieqeqelDfskLslhegKtqEMEqQVeILKLEkeLeaARkkLa
                   ++     ie+++++Dfs Lsl+++K+qEME+QV++L+LEk+Lea+R++L+
    KIAA0655   973 EQ-----IEDRDTMDFSGLSLIKLKKQEMETQVRVLELEKTLEAERMRLG 1017 

                   eiRKqeYkla<-*
                   e+RKq+Y la   
    KIAA0655  1018 ELRKQHYVLA    1027 

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