hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-09025723/chunk_1/iprscan-20080502-09025723.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0647 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00064 121.3 1.1e-31 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00064 1/1 1106 1175 .. 1 81 [] 121.3 1.1e-31 Alignments of top-scoring domains: SM00064: domain 1 of 1, from 1106 to 1175: score 121.3, E = 1.1e-31 *->etaphWvpDeeasnClmnCgkeFtlvtrRrHHCRnCGrifCskCssk + ++WvpD++as+C +nC++eF+l ++RrHHCRnCG++fC+ C++ KIAA0647 1106 TEVTRWVPDHMASHC-YNCDCEFWL-AKRRHHCRNCGNVFCAGCCHL 1150 kaplpklgkekkngknedftpvRVCdsCyerlsk<-* k+p+p+++ ++ pv VC+sCye+++ KIAA0647 1151 KLPIPDQQLYD---------PVLVCNSCYEHIQV 1175 //