hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08543639/chunk_1/iprscan-20080502-08543639.nocrc
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Query sequence: KIAA0642
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02213.6.ls GYF domain                                     106.6    6.7e-29   1
PF02213.6.fs GYF domain                                     104.6    1.7e-28   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02213.6.fs   1/1     564   619 ..     1    59 []   104.6  1.7e-28
PF02213.6.ls   1/1     564   619 ..     1    59 []   106.6  6.7e-29

Alignments of top-scoring domains:
PF02213.6.fs: domain 1 of 1, from 564 to 619: score 104.6, E = 1.7e-28
                   *->vlwlYkDpNkqgeiqGPFtasqMsqWyqaGYFtdslqvkrldeperi
                      ++w+YkDp  qgeiqGPF +++M++W+qaGYFt+sl vkr++++ + 
    KIAA0642   564    QKWYYKDP--QGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESF- 607  

                   eplgdlkrligl<-*
                   +plgd+++++g+   
    KIAA0642   608 QPLGDIMKMWGR    619  

PF02213.6.ls: domain 1 of 1, from 564 to 619: score 106.6, E = 6.7e-29
                   *->vlwlYkDpNkqgeiqGPFtasqMsqWyqaGYFtdslqvkrldeperi
                      ++w+YkDp  qgeiqGPF +++M++W+qaGYFt+sl vkr++++ + 
    KIAA0642   564    QKWYYKDP--QGEIQGPFNNQEMAEWFQAGYFTMSLLVKRACDESF- 607  

                   eplgdlkrligl<-*
                   +plgd+++++g+   
    KIAA0642   608 QPLGDIMKMWGR    619  

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