hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08461932/chunk_1/iprscan-20080502-08461932.nocrc
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Query sequence: KIAA0637
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00614                                                 298.7    4.3e-85   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00614    1/4     119   172 ..     1    57 []    70.4  2.2e-16
SM00614    2/4     289   342 ..     1    57 []    78.2  9.9e-19
SM00614    3/4     460   512 ..     1    57 []    78.6  7.7e-19
SM00614    4/4     562   615 ..     1    57 []    71.5  1.1e-16

Alignments of top-scoring domains:
SM00614: domain 1 of 4, from 119 to 172: score 70.4, E = 2.2e-16
                   *->kkrSkvWkhFtkiekkdngkrvetrAkCkyCgkklsyssk...gGTs
                      +k+S +WkhF  i++ d++k     A+C+yC k++s+++++++ +Ts
    KIAA0637   119    RKKSPAWKHFF-ISPRDSTK-----AICMYCVKEFSRGKNekdLSTS 159  

                   nLrrHLrrkHpar<-*
                   +L+rH rr Hp +   
    KIAA0637   160 CLMRHVRRAHPTV    172  

SM00614: domain 2 of 4, from 289 to 342: score 78.2, E = 9.9e-19
                   *->kkrSkvWkhFtkiekkdngkrvetrAkCkyCgkklsyssk...gGTs
                      ++rS vWkhF++ ++ dn k     A+C++C++++s+++++++ GTs
    KIAA0637   289    RRRSAVWKHFYL-SPLDNSK-----AVCIHCMNEFSRGKNgkdLGTS 329  

                   nLrrHLrrkHpar<-*
                   +L+rH++r H+a+   
    KIAA0637   330 CLIRHMWRAHRAI    342  

SM00614: domain 3 of 4, from 460 to 512: score 78.6, E = 7.7e-19
                   *->kkrSkvWkhFtkiekkdngkrvetrAkCkyCgkklsyssk..gGTsn
                      + +S+vW+hF++ ++ d+ k     A+C+yCg+ +s+++k++ GTs+
    KIAA0637   460    RLKSEVWHHFSL-APMDSLK-----AECRYCGCAISRGKKgdVGTSC 500  

                   LrrHLrrkHpar<-*
                   L+rHL r+Hp++   
    KIAA0637   501 LMRHLYRRHPEV    512  

SM00614: domain 4 of 4, from 562 to 615: score 71.5, E = 1.1e-16
                   *->kkrSkvWkhFtkiekkdngkrvetrAkCkyCgkklsyssk...gGTs
                      kk+Sk W+hF+ i+ +d++k     ++C +Cg+++s+++k+++ GTs
    KIAA0637   562    KKTSKLWNHFS-ICSADSTK-----VVCLHCGRTISRGKKptnLGTS 602  

                   nLrrHLrrkHpar<-*
                   +L rHL+r H+++   
    KIAA0637   603 CLLRHLQRFHSNV    615  

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