hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-08461932/chunk_1/iprscan-20080502-08461932.nocrc
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Query sequence: KIAA0637
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02892.5.ls BED zinc finger                                293.8      3e-85   4
PF02892.5.fs BED zinc finger                                286.3    7.9e-84   4
PF05699.5.fs hAT family dimerisation domain                  23.0    4.9e-06   1
PF05699.5.ls hAT family dimerisation domain                  23.6     0.0001   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02892.5.fs   1/4     122   170 ..     1    52 []    69.1    1e-19
PF02892.5.ls   1/4     122   170 ..     1    52 []    71.0  3.6e-18
PF02892.5.ls   2/4     292   340 ..     1    52 []    75.1    2e-19
PF02892.5.fs   2/4     292   340 ..     1    52 []    73.2  6.3e-21
PF02892.5.ls   3/4     463   510 ..     1    52 []    74.4  3.3e-19
PF02892.5.fs   3/4     463   510 ..     1    52 []    72.5    1e-20
PF02892.5.ls   4/4     565   613 ..     1    52 []    73.3    7e-19
PF02892.5.fs   4/4     565   613 ..     1    52 []    71.4  2.1e-20
PF05699.5.ls   1/1    1088  1168 ..     1    94 []    23.6   0.0001
PF05699.5.fs   1/1    1092  1168 ..     5    94 .]    23.0  4.9e-06

Alignments of top-scoring domains:
PF02892.5.fs: domain 1 of 4, from 122 to 170: score 69.1, E = 1e-19
                   *->SkvWkhFtkveeeedgkevegkakCkhCgkklsrkk...ksGTsnLi
                      S++WkhF +   ++d++    ka+C++C k++sr+k++++ +Ts+L+
    KIAA0637   122    SPAWKHFFIS--PRDST----KAICMYCVKEFSRGKnekDLSTSCLM 162  

                   rHLrrkHp<-*
                   rH rr Hp   
    KIAA0637   163 RHVRRAHP    170  

PF02892.5.ls: domain 1 of 4, from 122 to 170: score 71.0, E = 3.6e-18
                   *->SkvWkhFtkveeeedgkevegkakCkhCgkklsrkk...ksGTsnLi
                      S++WkhF +   ++d++    ka+C++C k++sr+k++++ +Ts+L+
    KIAA0637   122    SPAWKHFFIS--PRDST----KAICMYCVKEFSRGKnekDLSTSCLM 162  

                   rHLrrkHp<-*
                   rH rr Hp   
    KIAA0637   163 RHVRRAHP    170  

PF02892.5.ls: domain 2 of 4, from 292 to 340: score 75.1, E = 2e-19
                   *->SkvWkhFtkveeeedgkevegkakCkhCgkklsrkk...ksGTsnLi
                      S vWkhF++   + d++    ka+C+hC++++sr+k++++ GTs+Li
    KIAA0637   292    SAVWKHFYLS--PLDNS----KAVCIHCMNEFSRGKngkDLGTSCLI 332  

                   rHLrrkHp<-*
                   rH++r H+   
    KIAA0637   333 RHMWRAHR    340  

PF02892.5.fs: domain 2 of 4, from 292 to 340: score 73.2, E = 6.3e-21
                   *->SkvWkhFtkveeeedgkevegkakCkhCgkklsrkk...ksGTsnLi
                      S vWkhF++   + d++    ka+C+hC++++sr+k++++ GTs+Li
    KIAA0637   292    SAVWKHFYLS--PLDNS----KAVCIHCMNEFSRGKngkDLGTSCLI 332  

                   rHLrrkHp<-*
                   rH++r H+   
    KIAA0637   333 RHMWRAHR    340  

PF02892.5.ls: domain 3 of 4, from 463 to 510: score 74.4, E = 3.3e-19
                   *->SkvWkhFtkveeeedgkevegkakCkhCgkklsrkk..ksGTsnLir
                      S+vW+hF++   ++d+     ka+C++Cg+ +sr+k+++ GTs+L+r
    KIAA0637   463    SEVWHHFSLA--PMDSL----KAECRYCGCAISRGKkgDVGTSCLMR 503  

                   HLrrkHp<-*
                   HL r+Hp   
    KIAA0637   504 HLYRRHP    510  

PF02892.5.fs: domain 3 of 4, from 463 to 510: score 72.5, E = 1e-20
                   *->SkvWkhFtkveeeedgkevegkakCkhCgkklsrkk..ksGTsnLir
                      S+vW+hF++   ++d+     ka+C++Cg+ +sr+k+++ GTs+L+r
    KIAA0637   463    SEVWHHFSLA--PMDSL----KAECRYCGCAISRGKkgDVGTSCLMR 503  

                   HLrrkHp<-*
                   HL r+Hp   
    KIAA0637   504 HLYRRHP    510  

PF02892.5.ls: domain 4 of 4, from 565 to 613: score 73.3, E = 7e-19
                   *->SkvWkhFtkveeeedgkevegkakCkhCgkklsrkk...ksGTsnLi
                      Sk+W+hF+++  ++d++    k++C+hCg+++sr+k++++ GTs+L 
    KIAA0637   565    SKLWNHFSIC--SADST----KVVCLHCGRTISRGKkptNLGTSCLL 605  

                   rHLrrkHp<-*
                   rHL+r+H+   
    KIAA0637   606 RHLQRFHS    613  

PF02892.5.fs: domain 4 of 4, from 565 to 613: score 71.4, E = 2.1e-20
                   *->SkvWkhFtkveeeedgkevegkakCkhCgkklsrkk...ksGTsnLi
                      Sk+W+hF+++  ++d++    k++C+hCg+++sr+k++++ GTs+L 
    KIAA0637   565    SKLWNHFSIC--SADST----KVVCLHCGRTISRGKkptNLGTSCLL 605  

                   rHLrrkHp<-*
                   rHL+r+H+   
    KIAA0637   606 RHLQRFHS    613  

PF05699.5.ls: domain 1 of 1, from 1088 to 1168: score 23.6, E = 0.0001
                   *->ELdkYlselpvlprnteprgledfdvLeWWkeaqnssryPiLsklAr
                       +  Yl+e +vl+ +         d+L +W   +++++ P Ls lA 
    KIAA0637  1088    MVLAYLEE-EVLEHS--------CDPLTYWN--LKKASWPGLSALAV 1123 

                   diLsiPvssaasErsFStgklgrvldesrnrlepenveaLlcledwl<-*
                   + L +P s + sE+ F t       +  ++rl  e+ e+L++l+ +l   
    KIAA0637  1124 RFLGCPPSIVPSEKLFNTP--TENGSLGQSRLMMEHFEKLIFLKVNL    1168 

PF05699.5.fs: domain 1 of 1, from 1092 to 1168: score 23.0, E = 4.9e-06
                   *->YlselpvlprnteprgledfdvLeWWkeaqnssryPiLsklArdiLs
                      Yl+e +vl+ +         d+L +W   +++++ P Ls lA + L 
    KIAA0637  1092    YLEE-EVLEHS--------CDPLTYWN--LKKASWPGLSALAVRFLG 1127 

                   iPvssaasErsFStgklgrvldesrnrlepenveaLlcledwl<-*
                   +P s + sE+ F t       +  ++rl  e+ e+L++l+ +l   
    KIAA0637  1128 CPPSIVPSEKLFNTP--TENGSLGQSRLMMEHFEKLIFLKVNL    1168 

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