# /usr/local/bin/fasta34 -b50 -d10 -E0.01 -H -O./tmp/hj03305.fasta.huge -Q ../query/KIAA0637.ptfa ./tmplib.23663 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 KIAA0637, 1175 aa
 vs ./tmplib.23663 library

1986330 residues in  2037 sequences
  Expectation_n fit: rho(ln(x))= 6.7226+/-0.00641; mu= 10.2203+/- 0.437
 mean_var=148.5304+/-35.374, 0's: 0 Z-trim: 1  B-trim: 2 in 1/39
 Lambda= 0.105237

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 39, opt: 27, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(2037)
KIAA0785  ( 706 res)   hk05482                     ( 706)  503 88.6 3.6e-18


>>KIAA0785  ( 706 res)   hk05482                          (706 aa)
 initn: 402 init1: 136 opt: 503  Z-score: 418.2  bits: 88.6 E(): 3.6e-18
Smith-Waterman score: 556;  25.463% identity (56.790% similar) in 648 aa overlap (562-1167:32-662)

             540       550       560       570             580     
KIAA06 LASAESSSSKLTDLPTVVTKNNQVMFPVNSKKTSKLWNHFSI------CSADSTKVVCLH
                                     .  ::.:..:..      :  .  :. :  
KIAA07 AVQQAGSGGEAMENKSLESSQTDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRI
              10        20        30        40        50        60 

         590       600       610        620       630       640    
KIAA06 CGRTISRGKKPTNLGTSCLLRHLQRFHSNVLK-TEVSETARPSSPDTRVPRGTELSGASS
       :   :. . . .::.      : ..:   : . ::  . :  .. .   :....  : ..
KIAA07 CMAQIAYSGNTSNLSYHLEKNHPEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDA
              70        80        90       100       110       120 

          650       660       670       680       690       700    
KIAA06 FDDTNEKFYDSHPVAKKITSLIAEMIALDLQPYSFVDNVGFNRLLEYLKPQYSLPAPSYF
       .     . :::.   ...:. .  .:   : : :.::.  :. ::.   :.: ::. .:.
KIAA07 LAVKAGHGYDSKK-QQELTAAVLGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKYI
             130        140       150       160       170       180

          710       720        730       740        750       760  
KIAA06 SRTAIPGMYDNVKQIIMSHLKEAE-SGVIHFTSGIWMS-NQTREYLTLTAHWVSFESPAR
       :  :::  :  :...:...: ::   :.   .. .: : ::.: :.::.::.... .:  
KIAA07 STKAIPEKYGAVREVILKELAEATWCGI---STDMWRSENQNRAYVTLAAHFLGLGAPN-
              190       200          210       220       230       

            770       780       790       800       810       820  
KIAA06 PRCDDHHCSALLDVSQVDCDYSGNSIQKQLECWWEAWVTSTGLQVGITVTDNASIGKT--
         : .   :  : . .:  . ....: . :   .  :  :. .  : :.. . .: :.  
KIAA07 --CLSMG-SRCLKTFEVPEENTAETITRVLYEVFIEWGISAKV-FGATTNYGKDIVKACS
          240        250       260       270        280       290  

               830       840       850       860       870         
KIAA06 -LNEGEHSSVQCFSHTVNLIVSEAIKSQRMVQNLLSLARKICERVHRSPKAKEKLAELQR
        :. . :  . :..:: :  ...:..  ..   :::  ::. :  ..:  :   : : :.
KIAA07 LLDVAVH--MPCLGHTFNAGIQQAFQLPKL-GALLSRCRKLVEYFQQSAVAMYMLYEKQK
              300       310       320        330       340         

     880       890       900       910         920       930       
KIAA06 EYALPQHHLIQDVPSKWSTSFHMLERLIEQKRAINEMSVE--CNFRELISCDQWEVMQSV
       .  . .  :...  : :.... ::.:: ::. .:  . ::   : . ..  ..: .....
KIAA07 QQNVAHCMLVSNRVSWWGSTLAMLQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGL
     350       360       370       380       390       400         

       940       950        960       970       980        990     
KIAA06 CRALKPFEAASREMS-TQMSTLSQVIPMVHILNRKVEMLFEETMGIDTMLRSL-KEAMVS
        . :.::. ... .: ... :.:.: :..:.:  .. . ..::   :.   :. ::....
KIAA07 VELLQPFKQVAEMLSASRYPTISMVKPLLHML-LNTTLNIKET---DSKELSMAKEVIAK
     410       420       430       440        450          460     

        1000           1010      1020       1030       1040        
KIAA06 RLSATLHD-PRY-VF---ATLLDPRYKASLF-TEEEAEQYKQDLIRELE-LMNSTS----
       .:: : .. :.  .:   ::.::::::   : .  : .: .. ...: . :.....    
KIAA07 ELSKTYQETPEIDMFLNVATFLDPRYKRLPFLSAFERQQVENRVVEEAKGLLDKVKDGGY
         470       480       490       500       510       520     

                    1050      1060      1070      1080      1090   
KIAA06 -----------EDVAASHRCDAGSPSKDSAAEENLWSLVAKVKKKDPREKLPEAMVLAYL
                  :.  ...   ...:   :. .. :  .  ..   . .:.  .:.:.  :
KIAA07 RPAEDKIFPVPEEPPVKKLMRTSTPPPASVINNMLAEIFCQTGGVEDQEEW-HAQVVEEL
         530       540       550       560       570        580    

              1100      1110      1120      1130      1140         
KIAA06 E----EEVLEHSCDPLTYWNLKKASWPGLSALAVRFLGCPPSIVPSEKLFNTPTENGSLG
            ..::  . ::: .:. . : .: :  .  ..     . :  :.::.. ..  :  
KIAA07 SNFKSQKVLGLNEDPLKWWSDRLALFPLLPKVLQKYWCVTATRVAPERLFGSAANVVSAK
          590       600       610       620       630       640    

    1150      1160      1170                                       
KIAA06 QSRLMMEHFEKLIFLKVNLPLIYFQY                                  
       ..::   : .. .::  :                                          
KIAA07 RNRLAPAHVDEQVFLYENARSGAEAEPEDQDEGEWGLDQEQVFSLGDGVSGGFFGIRDSS
          650       660       670       680       690       700    




1175 residues in 1 query   sequences
1986330 residues in 2037 library sequences
 Scomplib [34.26]
 start: Thu Dec 18 15:10:11 2008 done: Thu Dec 18 15:10:12 2008
 Total Scan time:  0.740 Total Display time:  0.040

Function used was FASTA [version 34.26.5 April 26, 2007]