# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh01900.fasta.nr -Q ../query/KIAA0632.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0632, 727 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7824393 sequences Expectation_n fit: rho(ln(x))= 5.5683+/-0.000188; mu= 11.5765+/- 0.011 mean_var=83.8508+/-16.277, 0's: 25 Z-trim: 45 B-trim: 254 in 1/66 Lambda= 0.140062 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|194381492|dbj|BAG58700.1| unnamed protein produ ( 749) 4733 966.5 0 gi|62287483|sp|O75127.2|PTCD1_HUMAN RecName: Full= ( 700) 4672 954.1 0 gi|51593777|gb|AAH80580.1| Pentatricopeptide repea ( 700) 4664 952.5 0 gi|73695306|gb|AAI03496.1| Pentatricopeptide repea ( 700) 4662 952.1 0 gi|114614904|ref|XP_519233.2| PREDICTED: pentatric ( 700) 4599 939.4 0 gi|62287490|sp|Q5R655.1|PTCD1_PONAB RecName: Full= ( 698) 4515 922.4 0 gi|109066083|ref|XP_001111767.1| PREDICTED: simila ( 775) 4430 905.3 0 gi|45945517|gb|AAH03688.2| PTCD1 protein [Homo sap ( 595) 3961 810.4 0 gi|73958083|ref|XP_546978.2| PREDICTED: similar to ( 760) 3577 732.9 1e-208 gi|52789359|gb|AAH83097.1| Pentatricopeptide repea ( 695) 3375 692.1 1.9e-196 gi|74219722|dbj|BAE29626.1| unnamed protein produc ( 695) 3374 691.9 2.1e-196 gi|62511119|sp|Q8C2E4.1|PTCD1_MOUSE RecName: Full= ( 695) 3373 691.6 2.5e-196 gi|148687047|gb|EDL18994.1| pentatricopeptide repe ( 695) 3373 691.6 2.5e-196 gi|125858876|gb|AAI29117.1| Ptcd1 protein [Rattus ( 686) 3174 651.4 3.1e-184 gi|74355886|gb|AAI03662.1| PTCD1 protein [Homo sap ( 482) 3066 629.5 8.7e-178 gi|55778199|gb|AAH86472.1| LOC495833 protein [Xeno ( 687) 2132 440.9 7.5e-121 gi|149409152|ref|XP_001512126.1| PREDICTED: simila ( 687) 2113 437.0 1.1e-119 gi|68353972|ref|XP_698798.1| PREDICTED: pentatrico ( 694) 2039 422.1 3.4e-115 gi|193786060|dbj|BAG50949.1| unnamed protein produ ( 526) 2027 419.6 1.5e-114 gi|149034889|gb|EDL89609.1| rCG42656 [Rattus norve ( 652) 1996 413.4 1.3e-112 gi|163915440|gb|AAI57261.1| LOC100135205 protein [ ( 494) 1625 338.3 4e-90 gi|126334588|ref|XP_001370074.1| PREDICTED: hypoth ( 677) 1558 324.9 6.1e-86 gi|118097819|ref|XP_414799.2| PREDICTED: hypotheti ( 792) 1364 285.7 4.3e-74 gi|210130701|gb|EEA78372.1| hypothetical protein B ( 986) 1344 281.8 8.5e-73 gi|210101168|gb|EEA49237.1| hypothetical protein B ( 571) 1297 272.1 4e-70 gi|47218952|emb|CAF98150.1| unnamed protein produc ( 575) 1075 227.2 1.3e-56 gi|115896489|ref|XP_792275.2| PREDICTED: hypotheti ( 708) 644 140.2 2.5e-30 gi|91078688|ref|XP_971079.1| PREDICTED: similar to ( 648) 639 139.2 4.7e-30 gi|108877995|gb|EAT42220.1| conserved hypothetical ( 676) 588 128.9 6.1e-27 gi|157015941|gb|EAA11660.4| AGAP006051-PA [Anophel ( 676) 576 126.5 3.3e-26 gi|167868351|gb|EDS31734.1| pentatricopeptide repe ( 658) 570 125.2 7.5e-26 gi|194179872|gb|EDW93483.1| GE21482 [Drosophila ya ( 702) 566 124.5 1.4e-25 gi|193919747|gb|EDW18614.1| GI13329 [Drosophila mo ( 723) 563 123.9 2.1e-25 gi|194128513|gb|EDW50556.1| GM14694 [Drosophila se ( 686) 558 122.8 4.1e-25 gi|194195717|gb|EDX09293.1| GD13877 [Drosophila si ( 702) 553 121.8 8.5e-25 gi|194154093|gb|EDW69277.1| GJ13155 [Drosophila vi ( 721) 551 121.4 1.1e-24 gi|7295484|gb|AAF50798.1| CG4611 [Drosophila melan ( 703) 546 120.4 2.3e-24 gi|190653750|gb|EDV50993.1| GG15260 [Drosophila er ( 703) 544 120.0 3e-24 gi|54642581|gb|EAL31328.1| GA18300 [Drosophila pse ( 707) 542 119.6 4e-24 gi|193897439|gb|EDV96305.1| GH16176 [Drosophila gr ( 711) 539 119.0 6.1e-24 gi|194108117|gb|EDW30160.1| GL22616 [Drosophila pe ( 707) 537 118.6 8e-24 gi|215510416|gb|EEC19869.1| pentatricopeptide repe ( 485) 531 117.3 1.4e-23 gi|194161822|gb|EDW76723.1| GK19803 [Drosophila wi ( 700) 532 117.6 1.6e-23 gi|190624844|gb|EDV40368.1| GF23967 [Drosophila an ( 703) 530 117.2 2.1e-23 gi|212514731|gb|EEB16987.1| pentatricopeptide repe ( 634) 382 87.2 2e-14 gi|156537390|ref|XP_001606749.1| PREDICTED: simila ( 650) 363 83.4 2.9e-13 gi|115841614|ref|XP_001196253.1| PREDICTED: hypoth ( 164) 329 76.1 1.2e-11 gi|190588268|gb|EDV28310.1| hypothetical protein T ( 522) 332 77.1 1.9e-11 gi|198416303|ref|XP_002123758.1| PREDICTED: simila ( 648) 330 76.7 2.9e-11 gi|156227615|gb|EDO48418.1| predicted protein [Nem ( 714) 316 73.9 2.2e-10 >>gi|194381492|dbj|BAG58700.1| unnamed protein product [ (749 aa) initn: 4733 init1: 4733 opt: 4733 Z-score: 5165.8 bits: 966.5 E(): 0 Smith-Waterman score: 4733; 98.611% identity (99.028% similar) in 720 aa overlap (8-727:30-749) 10 20 30 KIAA06 AAGTGQGSPSECTAPDTSSPGGTGKPEMDFVRLARLFA ::: . .::::::::::::::::::: gi|194 MASVVPVKDKKLLEVKLGELPSWILMRDFSPSGIFGAFQRGPGGTGKPEMDFVRLARLFA 10 20 30 40 50 60 40 50 60 70 80 90 KIAA06 RARPMGLFILQHLDPCRARWAGGREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RARPMGLFILQHLDPCRARWAGGREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPS 70 80 90 100 110 120 100 110 120 130 140 150 KIAA06 HSNSTATQEEDEEEEESFGTLSDKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HSNSTATQEEDEEEEESFGTLSDKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRG 130 140 150 160 170 180 160 170 180 190 200 210 KIAA06 RRNTPYWYFLQCKHLIKEGKLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RRNTPYWYFLQCKHLIKEGKLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKK 190 200 210 220 230 240 220 230 240 250 260 270 KIAA06 AFNLYNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AFNLYNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYH 250 260 270 280 290 300 280 290 300 310 320 330 KIAA06 ALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLML 310 320 330 340 350 360 340 350 360 370 380 390 KIAA06 SLGLQPSRDSYNLLLVAARDCGLGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SLGLQPSRDSYNLLLVAARDCGLGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKA 370 380 390 400 410 420 400 410 420 430 440 450 KIAA06 GNLMSAMLHVEALERQLFLEPSQALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GNLMSAMLHVEALERQLFLEPSQALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVAL 430 440 450 460 470 480 460 470 480 490 500 510 KIAA06 KPPPVELEVNLLTPGAVPPTVVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KPPPVELEVNLLTPGAVPPTVVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLT 490 500 510 520 530 540 520 530 540 550 560 570 KIAA06 LLAEVVESGSPAESLLLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LLAEVVESGSPAESLLLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGL 550 560 570 580 590 600 580 590 600 610 620 630 KIAA06 VPNLQTFCNLAIGCHRPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VPNLQTFCNLAIGCHRPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILK 610 620 630 640 650 660 640 650 660 670 680 690 KIAA06 DMKQNRVPVNEVVIRQLEFAAQYPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETP ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|194 DMKQNRVPVNEVVIRQLEFAAQYPPTFDRYQGKNTYLEEIDGFRAYYKQWLTVMPAEETP 670 680 690 700 710 720 700 710 720 KIAA06 HPWQKFRTKPQGDQDTGKEADDGCALGGR ::::::::::::::::::::::::::::: gi|194 HPWQKFRTKPQGDQDTGKEADDGCALGGR 730 740 >>gi|62287483|sp|O75127.2|PTCD1_HUMAN RecName: Full=Pent (700 aa) initn: 4672 init1: 4672 opt: 4672 Z-score: 5099.6 bits: 954.1 E(): 0 Smith-Waterman score: 4672; 100.000% identity (100.000% similar) in 700 aa overlap (28-727:1-700) 10 20 30 40 50 60 KIAA06 AAGTGQGSPSECTAPDTSSPGGTGKPEMDFVRLARLFARARPMGLFILQHLDPCRARWAG ::::::::::::::::::::::::::::::::: gi|622 MDFVRLARLFARARPMGLFILQHLDPCRARWAG 10 20 30 70 80 90 100 110 120 KIAA06 GREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEEEESFGTLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 GREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEEEESFGTLS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA06 DKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 DKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLV 100 110 120 130 140 150 190 200 210 220 230 240 KIAA06 EALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 EALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTA 160 170 180 190 200 210 250 260 270 280 290 300 KIAA06 LFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 LFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEI 220 230 240 250 260 270 310 320 330 340 350 360 KIAA06 IHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 IHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG 280 290 300 310 320 330 370 380 390 400 410 420 KIAA06 LGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 LGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEPS 340 350 360 370 380 390 430 440 450 460 470 480 KIAA06 QALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEVNLLTPGAVPPTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 QALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEVNLLTPGAVPPTVV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA06 SFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLLALLDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 SFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLLALLDE 460 470 480 490 500 510 550 560 570 580 590 600 KIAA06 HQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 HQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA06 LLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPVNEVVIRQLEFAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 LLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPVNEVVIRQLEFAAQ 580 590 600 610 620 630 670 680 690 700 710 720 KIAA06 YPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQGDQDTGKEADD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 YPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQGDQDTGKEADD 640 650 660 670 680 690 KIAA06 GCALGGR ::::::: gi|622 GCALGGR 700 >>gi|51593777|gb|AAH80580.1| Pentatricopeptide repeat do (700 aa) initn: 4664 init1: 4664 opt: 4664 Z-score: 5090.9 bits: 952.5 E(): 0 Smith-Waterman score: 4664; 99.857% identity (99.857% similar) in 700 aa overlap (28-727:1-700) 10 20 30 40 50 60 KIAA06 AAGTGQGSPSECTAPDTSSPGGTGKPEMDFVRLARLFARARPMGLFILQHLDPCRARWAG ::::::::::::::::::::::::::::::::: gi|515 MDFVRLARLFARARPMGLFILQHLDPCRARWAG 10 20 30 70 80 90 100 110 120 KIAA06 GREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEEEESFGTLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|515 GREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEEEESFGTLS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA06 DKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|515 DKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLV 100 110 120 130 140 150 190 200 210 220 230 240 KIAA06 EALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|515 EALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTA 160 170 180 190 200 210 250 260 270 280 290 300 KIAA06 LFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|515 LFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEI 220 230 240 250 260 270 310 320 330 340 350 360 KIAA06 IHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|515 IHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG 280 290 300 310 320 330 370 380 390 400 410 420 KIAA06 LGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|515 LGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEPS 340 350 360 370 380 390 430 440 450 460 470 480 KIAA06 QALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEVNLLTPGAVPPTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|515 QALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEVNLLTPGAVPPTVV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA06 SFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLLALLDE ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|515 SFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAEFLLLALLDE 460 470 480 490 500 510 550 560 570 580 590 600 KIAA06 HQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|515 HQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA06 LLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPVNEVVIRQLEFAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|515 LLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPVNEVVIRQLEFAAQ 580 590 600 610 620 630 670 680 690 700 710 720 KIAA06 YPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQGDQDTGKEADD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|515 YPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQGDQDTGKEADD 640 650 660 670 680 690 KIAA06 GCALGGR ::::::: gi|515 GCALGGR 700 >>gi|73695306|gb|AAI03496.1| Pentatricopeptide repeat do (700 aa) initn: 4662 init1: 4662 opt: 4662 Z-score: 5088.7 bits: 952.1 E(): 0 Smith-Waterman score: 4662; 99.857% identity (99.857% similar) in 700 aa overlap (28-727:1-700) 10 20 30 40 50 60 KIAA06 AAGTGQGSPSECTAPDTSSPGGTGKPEMDFVRLARLFARARPMGLFILQHLDPCRARWAG ::::::::::::::::::::::::::::::::: gi|736 MDFVRLARLFARARPMGLFILQHLDPCRARWAG 10 20 30 70 80 90 100 110 120 KIAA06 GREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEEEESFGTLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 GREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEEEESFGTLS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA06 DKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLV ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|736 DKYSSRRLFRKSAAQFHNLRFGEWRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLV 100 110 120 130 140 150 190 200 210 220 230 240 KIAA06 EALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 EALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTA 160 170 180 190 200 210 250 260 270 280 290 300 KIAA06 LFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 LFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEI 220 230 240 250 260 270 310 320 330 340 350 360 KIAA06 IHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 IHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG 280 290 300 310 320 330 370 380 390 400 410 420 KIAA06 LGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 LGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEPS 340 350 360 370 380 390 430 440 450 460 470 480 KIAA06 QALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEVNLLTPGAVPPTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 QALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEVNLLTPGAVPPTVV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA06 SFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLLALLDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 SFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLLALLDE 460 470 480 490 500 510 550 560 570 580 590 600 KIAA06 HQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 HQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA06 LLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPVNEVVIRQLEFAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 LLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPVNEVVIRQLEFAAQ 580 590 600 610 620 630 670 680 690 700 710 720 KIAA06 YPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQGDQDTGKEADD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 YPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQGDQDTGKEADD 640 650 660 670 680 690 KIAA06 GCALGGR ::::::: gi|736 GCALGGR 700 >>gi|114614904|ref|XP_519233.2| PREDICTED: pentatricopep (700 aa) initn: 4599 init1: 4599 opt: 4599 Z-score: 5019.9 bits: 939.4 E(): 0 Smith-Waterman score: 4599; 98.571% identity (99.571% similar) in 700 aa overlap (28-727:1-700) 10 20 30 40 50 60 KIAA06 AAGTGQGSPSECTAPDTSSPGGTGKPEMDFVRLARLFARARPMGLFILQHLDPCRARWAG ::::::::::::::::::::::::::::::::: gi|114 MDFVRLARLFARARPMGLFILQHLDPCRARWAG 10 20 30 70 80 90 100 110 120 KIAA06 GREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEEEESFGTLS ::::::::.::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|114 GREGLMRPLWAPFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEQEESFGTLS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA06 DKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLV .:::::.::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|114 NKYSSRKLFRKSAAQFHNLRFGERRDEQMEPEPKLWRGRRNTPYWYFLQCKRLIKEGKLV 100 110 120 130 140 150 190 200 210 220 230 240 KIAA06 EALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTA 160 170 180 190 200 210 250 260 270 280 290 300 KIAA06 LFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEI 220 230 240 250 260 270 310 320 330 340 350 360 KIAA06 IHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG 280 290 300 310 320 330 370 380 390 400 410 420 KIAA06 LGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEPS :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|114 LGDPQVASELLLKPREEATVLQLPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEPS 340 350 360 370 380 390 430 440 450 460 470 480 KIAA06 QALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEVNLLTPGAVPPTVV :::::::: ::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|114 QALGPPEPLEARVPGKAQPEVDTKAEPSHTAALTPVALKPPPVELEVNLLTPGAVPPTVV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA06 SFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLLALLDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLLALLDE 460 470 480 490 500 510 550 560 570 580 590 600 KIAA06 HQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA06 LLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPVNEVVIRQLEFAAQ ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|114 LLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLINILKDMKQNRVPVNEVVIRQLEFAAQ 580 590 600 610 620 630 670 680 690 700 710 720 KIAA06 YPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQGDQDTGKEADD :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|114 YPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKLRTKPQGDQDTGKEADD 640 650 660 670 680 690 KIAA06 GCALGGR ::::::: gi|114 GCALGGR 700 >>gi|62287490|sp|Q5R655.1|PTCD1_PONAB RecName: Full=Pent (698 aa) initn: 4003 init1: 4003 opt: 4515 Z-score: 4928.2 bits: 922.4 E(): 0 Smith-Waterman score: 4515; 96.571% identity (99.000% similar) in 700 aa overlap (28-727:1-698) 10 20 30 40 50 60 KIAA06 AAGTGQGSPSECTAPDTSSPGGTGKPEMDFVRLARLFARARPMGLFILQHLDPCRARWAG ::::::::::.:::::::::::::::::::::: gi|622 MDFVRLARLFSRARPMGLFILQHLDPCRARWAG 10 20 30 70 80 90 100 110 120 KIAA06 GREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEEEESFGTLS ::::::::.::::.:::::::::::::::::::::::::::::::::::::: :::.:: gi|622 GREGLMRPVWAPFGSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEE--SFGALS 40 50 60 70 80 90 130 140 150 160 170 180 KIAA06 DKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLV ::::::::::::.::::::::::::::: .::::::::.::::::::::::.:::::::: gi|622 DKYSSRRLFRKSTAQFHNLRFGERRDEQTKPEPKLWRGQRNTPYWYFLQCKRLIKEGKLV 100 110 120 130 140 150 190 200 210 220 230 240 KIAA06 EALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTA ::::::::::::::::::::::::.:::::::::::::::.::::::::::::::::::: gi|622 EALDLFERQMLKEERLQPMESNYTALIGGCGRVGYLKKAFSLYNQMKKRDLEPSDATYTA 160 170 180 190 200 210 250 260 270 280 290 300 KIAA06 LFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 LFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEI 220 230 240 250 260 270 310 320 330 340 350 360 KIAA06 IHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 IHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG 280 290 300 310 320 330 370 380 390 400 410 420 KIAA06 LGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEPS ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: : gi|622 LGDPQVASELLLKPREEATVLQPPVSRQQPRRTAQAKAGNLMSAMLHVEALERQLFLETS 340 350 360 370 380 390 430 440 450 460 470 480 KIAA06 QALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEVNLLTPGAVPPTVV ::::::::::::::.::::::::::::::::::: :::::::.::::::::::::::::: gi|622 QALGPPEPPEARVPSKAQPEVDTKAEPSHTAALTPVALKPPPLELEVNLLTPGAVPPTVV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA06 SFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLLALLDE ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|622 SFGTVTTPADRLALVGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLLALLDE 460 470 480 490 500 510 550 560 570 580 590 600 KIAA06 HQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 HQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCHRPKDGLQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA06 LLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPVNEVVIRQLEFAAQ :::::::::::::.::::::::::.:::::::::.::::::::::::::::::::::::: gi|622 LLTDMKKSQVTPNSHIYSALINAAVRKLNYTYLINILKDMKQNRVPVNEVVIRQLEFAAQ 580 590 600 610 620 630 670 680 690 700 710 720 KIAA06 YPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQGDQDTGKEADD ::::::::::::::::::::::::::::::::::::::::::::::::: :::: ::::: gi|622 YPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQEDQDTRKEADD 640 650 660 670 680 690 KIAA06 GCALGGR ::::::: gi|622 GCALGGR >>gi|109066083|ref|XP_001111767.1| PREDICTED: similar to (775 aa) initn: 4427 init1: 4379 opt: 4430 Z-score: 4834.7 bits: 905.3 E(): 0 Smith-Waterman score: 4430; 91.609% identity (96.011% similar) in 727 aa overlap (6-727:49-775) 10 20 30 KIAA06 AAGTGQGSPSECTAPDT----SSPGGTGKPEMDFV :: : . : .:::::::::... gi|109 NRARSPAAPNPGIRAETRQRGRKCPNQDWSQGRPRRETEAAKVCVERGPGGTGKPEMNLM 20 30 40 50 60 70 40 50 60 70 80 90 KIAA06 RLARLFARARPMGLFILQHLDPCRARWAGGREGLMRPMWAPFSSSSSQLPLGQERQENTG ::.:::.::::::::.::::::: :::::::::::::.:: :::::::::::::. :::: gi|109 RLTRLFSRARPMGLFVLQHLDPCSARWAGGREGLMRPVWAAFSSSSSQLPLGQEHLENTG 80 90 100 110 120 130 100 110 120 130 140 150 KIAA06 SLGSDPSHSNSTATQEEDEEEEESFGTLSDKYSSRRLFRKSAAQFHNLRFGERRDEQMEP :::::::::::.: ::::::::::::::::::::::::.::.:::::::: :.:.: :: gi|109 SLGSDPSHSNSAAMQEEDEEEEESFGTLSDKYSSRRLFHKSTAQFHNLRFREQREEPEEP 140 150 160 170 180 190 160 170 180 190 200 210 KIAA06 EPKLWRGRRNTPYWYFLQCKHLIKEGKLVEALDLFERQMLKEERLQPMESNYTVLIGGCG :::::.::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|109 EPKLWQGRRNTPYWYFLQCKRLIKEGKLVEALDLFERQMLKEERLQPMESNYTVLIGGCG 200 210 220 230 240 250 220 230 240 250 260 270 KIAA06 RVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFE :::::::::.::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 RVGYLKKAFKLYNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNIE 260 270 280 290 300 310 280 290 300 310 320 330 KIAA06 LNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCIQDKKTGFRYAL ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 LNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHIVTEETFSFLLMGCIQDKKTGFRYAL 320 330 340 350 360 370 340 350 360 370 380 390 KIAA06 QVWRLMLSLGLQPSRDSYNLLLVAARDCGLGDPQVASELLLKPREEATVLQPPVSRQRPR ::::::::::::::::::::::.:::::::::::::::::::: ::::::::::.::::: gi|109 QVWRLMLSLGLQPSRDSYNLLLAAARDCGLGDPQVASELLLKPSEEATVLQPPVGRQRPR 380 390 400 410 420 430 400 410 420 430 440 450 KIAA06 RTAQAKAGNLMSAMLHVEALERQLFLEPSQALGPPEPPEARVPGKAQPEVDTKAEPSHTA ::::::::: :::.::::::::::::::::::::::: ::::::::::::.::::::::. gi|109 RTAQAKAGNRMSAVLHVEALERQLFLEPSQALGPPEPQEARVPGKAQPEVETKAEPSHTV 440 450 460 470 480 490 460 470 480 490 500 510 KIAA06 ALTAVALKPPPVELEVNLLTPGAVPPTVVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQ :: ::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 ALPPVALKPPPVELEVNLLTPGAVPPTVVSFGTVSTPADRLALIGGLEGFLSKMAEHRQQ 500 510 520 530 540 550 520 530 540 550 560 570 KIAA06 PDIRTLTLLAEVVESGSPAESLLLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLP ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|109 PDIRTLTLLAEVVESGSPAESLLLALLDKHQVEADLTFFNTLVRKKSKLGDLEGAKALLP 560 570 580 590 600 610 580 590 600 610 620 630 KIAA06 VLAKRGLVPNLQTFCNLAIGCHRPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRKLNYT ::::::::::::::::::::::.:::::::::::::::: :::::::::::::.:::.:: gi|109 VLAKRGLVPNLQTFCNLAIGCHKPKDGLQLLTDMKKSQVIPNTHIYSALINAAVRKLDYT 620 630 640 650 660 670 640 650 660 670 680 690 KIAA06 YLISILKDMKQNRVPVNEVVIRQLEFAAQYPPTFDRYQGKNTYLEKIDGFRAYYKQWLTV :::.:::::::::::::::::::::::::::::::::::.:::: ::::::::::::::: gi|109 YLINILKDMKQNRVPVNEVVIRQLEFAAQYPPTFDRYQGRNTYLAKIDGFRAYYKQWLTV 680 690 700 710 720 730 700 710 720 KIAA06 MPAEETPHPWQKFRTKPQGDQDTGKEAD-DGCALGGR :::::: ::::::::::: ::::::::: :::::::: gi|109 MPAEETLHPWQKFRTKPQEDQDTGKEADVDGCALGGR 740 750 760 770 >>gi|45945517|gb|AAH03688.2| PTCD1 protein [Homo sapiens (595 aa) initn: 3961 init1: 3961 opt: 3961 Z-score: 4324.2 bits: 810.4 E(): 0 Smith-Waterman score: 3961; 100.000% identity (100.000% similar) in 595 aa overlap (133-727:1-595) 110 120 130 140 150 160 KIAA06 TATQEEDEEEEESFGTLSDKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRGRRNT :::::::::::::::::::::::::::::: gi|459 AAQFHNLRFGERRDEQMEPEPKLWRGRRNT 10 20 30 170 180 190 200 210 220 KIAA06 PYWYFLQCKHLIKEGKLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 PYWYFLQCKHLIKEGKLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNL 40 50 60 70 80 90 230 240 250 260 270 280 KIAA06 YNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 YNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLK 100 110 120 130 140 150 290 300 310 320 330 340 KIAA06 MAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 MAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGL 160 170 180 190 200 210 350 360 370 380 390 400 KIAA06 QPSRDSYNLLLVAARDCGLGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 QPSRDSYNLLLVAARDCGLGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLM 220 230 240 250 260 270 410 420 430 440 450 460 KIAA06 SAMLHVEALERQLFLEPSQALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 SAMLHVEALERQLFLEPSQALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPP 280 290 300 310 320 330 470 480 490 500 510 520 KIAA06 VELEVNLLTPGAVPPTVVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 VELEVNLLTPGAVPPTVVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAE 340 350 360 370 380 390 530 540 550 560 570 580 KIAA06 VVESGSPAESLLLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 VVESGSPAESLLLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNL 400 410 420 430 440 450 590 600 610 620 630 640 KIAA06 QTFCNLAIGCHRPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 QTFCNLAIGCHRPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQ 460 470 480 490 500 510 650 660 670 680 690 700 KIAA06 NRVPVNEVVIRQLEFAAQYPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|459 NRVPVNEVVIRQLEFAAQYPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQ 520 530 540 550 560 570 710 720 KIAA06 KFRTKPQGDQDTGKEADDGCALGGR ::::::::::::::::::::::::: gi|459 KFRTKPQGDQDTGKEADDGCALGGR 580 590 >>gi|73958083|ref|XP_546978.2| PREDICTED: similar to pen (760 aa) initn: 3250 init1: 3044 opt: 3577 Z-score: 3903.3 bits: 732.9 E(): 1e-208 Smith-Waterman score: 3577; 76.620% identity (90.141% similar) in 710 aa overlap (25-727:55-760) 10 20 30 40 50 KIAA06 AAGTGQGSPSECTAPDTSSPGGTGKPEMDFVRLARLFARARPMGLFILQHLDPC :::.:..:.:.::.: ::.:: :::::: gi|739 RTTEGPRVSQPGSGLSDFIIFLTCARPWRKKPELDLMRFAQLFSRFRPVGLSALQHLDPL 30 40 50 60 70 80 60 70 80 90 100 110 KIAA06 RARWAGGREG--LMRPMWAPFSSSSS--QLPLGQERQENTGSLGSDPSHSNSTATQEEDE :..::::::: .: : . ::: :::.:: :.:..::.:: :. . :::::: gi|739 RVKWAGGREGPTWLRAAWLTRACSSSPLQLPIGQGNQKNASSLSSDLSQPSPTATQEE-- 90 100 110 120 130 140 120 130 140 150 160 KIAA06 EEEESFGTLSDKYSSRRLFRKSAAQFHNLRFGER--RDEQMEPEPKLWRGRRNTPYWYFL :: ::::::.::::::.::::.::..:::. :. .::. : ::: ::::.:::::::: gi|739 -EEGSFGTLSSKYSSRRMFRKSTAQLYNLRLREQSAEDEERELEPKSWRGRKNTPYWYFL 150 160 170 180 190 200 170 180 190 200 210 220 KIAA06 QCKHLIKEGKLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKK ::::::.::::.::::::::::::::::::.: :::::::::::.::::::: :::.::: gi|739 QCKHLIREGKLAEALDLFERQMLKEERLQPLECNYTVLIGGCGRAGYLKKAFRLYNDMKK 210 220 230 240 250 260 230 240 250 260 270 280 KIAA06 RDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCA :::::.:::::::::::::::::::::::::::::::::.::.:::::::::::::: :: gi|739 RDLEPTDATYTALFNVCAESPWKDSALQSALKLRQQLQARNFQLNLKTYHALLKMAALCA 270 280 290 300 310 320 290 300 310 320 330 340 KIAA06 DLRMCLDVFKEIIHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDS ::::::::::::..:::.:::::::.:::::::::::::::.::::: :::::::::. . gi|739 DLRMCLDVFKEIVQKGHAVTEETFSYLLMGCIQDKKTGFRYTLQVWRQMLSLGLQPSQHG 330 340 350 360 370 380 350 360 370 380 390 400 KIAA06 YNLLLVAARDCGLGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHV ::::: ::::::::::.::: :::.:::: ..::: .. : :. :::..:. :: . :: gi|739 YNLLLGAARDCGLGDPEVASALLLRPREEMVLLQPRAGGFRTRKRAQAQVGDGMS-IKHV 390 400 410 420 430 440 410 420 430 440 450 460 KIAA06 EALERQLFLEPSQAL-GPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEV :::::::::::::.. : ::: :::.:.:::::::::.::.: ..::..: .: ::. gi|739 EALERQLFLEPSQVVEGLPEPREARAPSKAQPEVDTKTEPDHMVTLTSLASEPSRWGLEA 450 460 470 480 490 500 470 480 490 500 510 520 KIAA06 NLLTPGAVPPTVVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESG :::: :::::.::::::::::::::::.:::::::.::::: .:.:.:::::::::: : gi|739 NLLTLGAVPPAVVSFGTVTTPADRLALMGGLEGFLGKMAEHGLKPNIKTLTLLAEVVEPG 510 520 530 540 550 560 530 540 550 560 570 580 KIAA06 SPAESLLLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCN ::::: ::..:: ::::::.::::::.:::::::::::::::::.::.::..:::::::: gi|739 SPAESSLLTVLDTHQVEADVTFFNTLMRKKSKLGDLEGAKALLPLLARRGIIPNLQTFCN 570 580 590 600 610 620 590 600 610 620 630 640 KIAA06 LAIGCHRPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPV :::::.::.::::::.::::::.::::::::.:::::..::.:::::.:::::.:::::: gi|739 LAIGCRRPRDGLQLLADMKKSQMTPNTHIYSTLINAALKKLDYTYLIDILKDMRQNRVPV 630 640 650 660 670 680 650 660 670 680 690 700 KIAA06 NEVVIRQLEFAAQYPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTK :::::::::::::::::::::. ::::::::::::::::::: :::::::::::::: . gi|739 NEVVIRQLEFAAQYPPTFDRYKEKNTYLEKIDGFRAYYKQWLKSMPAEETPHPWQKFRIR 690 700 710 720 730 740 710 720 KIAA06 PQGDQDTGKEADDGCALGGR :.:::.. ::: .:::: gi|739 PMGDQESTTEADMDRSLGGR 750 760 >>gi|52789359|gb|AAH83097.1| Pentatricopeptide repeat do (695 aa) initn: 3340 init1: 3048 opt: 3375 Z-score: 3683.3 bits: 692.1 E(): 1.9e-196 Smith-Waterman score: 3375; 73.882% identity (89.177% similar) in 693 aa overlap (28-718:1-689) 10 20 30 40 50 KIAA06 AAGTGQGSPSECTAPDTSSPGGTGKPEMDFVRLARLFARARPMGLFILQHLDPC-RARWA ::..::.:::. ::.:: .::::: .::. gi|527 MDLLRLSRLFSGPRPIGLSVLQHLDLVGSTRWT 10 20 30 60 70 80 90 100 110 KIAA06 GGREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEEEESFGTL ::::: : . : : .::: ::::. :.. .:: :: :. ...: ::: ::::::.: gi|527 GGREGPAR-LRAAFCGSSSPLPLGSGNQKEMSSLCSDSSKLSTVAPQEE--AEEESFGSL 40 50 60 70 80 90 120 130 140 150 160 170 KIAA06 SDKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKL : :.::::.:.::.::..::.. :. :. : ::. ::::::: ::::.:::.::::::: gi|527 SGKFSSRRIFHKSTAQLYNLQLKEQGGEEEELEPRPWRGRRNTQYWYFFQCKRLIKEGKL 100 110 120 130 140 150 180 190 200 210 220 230 KIAA06 VEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYT .::::::::::::::::::.: ::::::::::::::::::: :.:.:::::::::::::: gi|527 AEALDLFERQMLKEERLQPLECNYTVLIGGCGRVGYLKKAFRLFNDMKKRDLEPSDATYT 160 170 180 190 200 210 240 250 260 270 280 290 KIAA06 ALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKE ::::::::::::::::::::::::::::.::.:::::::::::.::::::::.::::::: gi|527 ALFNVCAESPWKDSALQSALKLRQQLQARNFQLNLKTYHALLKVAAKCADLRLCLDVFKE 220 230 240 250 260 270 300 310 320 330 340 350 KIAA06 IIHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDC ::..::.:::::: :::.::::::::::: :.:::: :::::..::: .::::: ::::: gi|527 IIQRGHAVTEETFCFLLVGCIQDKKTGFRQAMQVWRQMLSLGIKPSRHGYNLLLEAARDC 280 290 300 310 320 330 360 370 380 390 400 410 KIAA06 GLGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEP :::::.:::.::: .::. .: :: .:. : .:::. . .: . ::::::::::::: gi|527 GLGDPEVASRLLLTSQEETILLPPPKGRHMAGRKVQAKTVHGVS-LRHVEALERQLFLEP 340 350 360 370 380 420 430 440 450 460 470 KIAA06 SQAL-GPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEVNLLTPGAVPPT :: : ::: ::::: ...::::.: :::.::.::: .: :: .::::.::. :.. :. gi|527 SQKLEGPPALPEARVTSRTQPEVETTAEPGHTVALTPLASKPTHLELEVSLLSLGTLSPA 390 400 410 420 430 440 480 490 500 510 520 530 KIAA06 VVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLLALL :::::::.::::::::.:::::::.::.:: ::::.:::::::::: :: ::: ::..: gi|527 VVSFGTVATPADRLALMGGLEGFLGKMTEHGLQPDIKTLTLLAEVVEPGSTAESSLLSVL 450 460 470 480 490 500 540 550 560 570 580 590 KIAA06 DEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCHRPKDG :.:.::::.::::::.:::::::::::::::::.:::.:.::::.::::::::::::.:: gi|527 DRHRVEADVTFFNTLIRKKSKLGDLEGAKALLPILAKKGIVPNLRTFCNLAIGCHRPRDG 510 520 530 540 550 560 600 610 620 630 640 650 KIAA06 LQLLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPVNEVVIRQLEFA .:::.:::::::.:: ::::.:::::..::.:::::::::::.:: :::::::.:::::: gi|527 MQLLADMKKSQVSPNIHIYSTLINAALKKLDYTYLISILKDMRQNSVPVNEVVVRQLEFA 570 580 590 600 610 620 660 670 680 690 700 710 KIAA06 AQYPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQGDQDTGKEA :.::::::::.:::::::::::::::::::: .:::::.:::::.:..:: ::::: .: gi|527 AEYPPTFDRYKGKNTYLEKIDGFRAYYKQWLKAMPAEEAPHPWQEFQNKPVGDQDTTDKA 630 640 650 660 670 680 720 KIAA06 DDGCALGGR gi|527 GGLRDG 690 727 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 11:12:12 2009 done: Thu Mar 5 11:15:50 2009 Total Scan time: 1561.900 Total Display time: 0.400 Function used was FASTA [version 34.26.5 April 26, 2007]