hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-08005056/chunk_1/iprscan-20080502-08005056.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0611 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR01652 ATPase-Plipid: phospholipid-translocati 857.5 2.1e-255 1 TIGR01494 ATPase_P-type: ATPase, P-type (transpor 342.8 1.9e-100 7 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR01652 1/1 39 912 .] 1 1249 [] 857.5 2.1e-255 TIGR01494 2/7 168 275 .. 137 236 .. 77.3 1.5e-20 TIGR01494 5/7 504 561 .. 311 368 .. 74.4 9e-20 TIGR01494 6/7 621 737 .. 365 478 .] 129.8 2.5e-36 Alignments of top-scoring domains: TIGR01652: domain 1 of 1, from 39 to 912: score 857.5, E = 2.1e-255 *->FpsNkIsTtKYtvlTFlPKnLFeQFkrfANiYFLvvAllqqvPilsp +p+N I + KY+++TFlP LF+QFk+f N+YFL +A++q+vP + KIAA0611 39 YPRNVINNQKYNFFTFLPGVLFNQFKYFFNLYFLLLACSQFVPEMRL 85 tnrgtsivPLavVLlvtaiKeAiEDirRrkrDkevNNrltevLegveNeN + ++t+ vPL +VL vt i eA+E ir +rDkevN++ + L+ KIAA0611 86 GALYTYWVPLGFVLAVTVIREAVEEIRCYVRDKEVNSQVYSRLTA----- 130 vltdnIsLWRklKKFIsytkedlseelKkkrisRKRHellvtkTVdtish KIAA0611 - -------------------------------------------------- - RsSLdSidayrlSvdydrleldeinleqganeasvvdrsltgssdgkFve KIAA0611 - -------------------------------------------------- - ikWKdlrVGDIvKVkkderiPADllLLSSSepdGvCYVETaNLDGETNLK KIAA0611 - -------------------------------------------------- - lRqAleeTqkmlteediknfsGeIecEqPnasLYsFqGnlkidgkakskI KIAA0611 - -------------------------------------------------- - rqlPLspdNiLLRGctLrNTkwviGvVvYTGhDTKlmrNatkaGPsKRSr RG+ v+GvV+YTG++ + +N++++ sK + KIAA0611 131 ------------RGT-------VVGVVLYTGRELRSVMNTSNP-RSKIGL 160 iEkelNflIiiLFllLivLclissvgagiysdadgkdldlirwYleldks e+N l +iLF+ L+v +l+++++ ++ rwYl KIAA0611 161 FDLEVNCLTKILFGALVVVSLVMVALQHFAG----------RWYL----- 195 eRPGGkdYeYrnaaangFfsfltalILFssLIPISLYVslElvKsvQAty + ++l LFs++IPISL+V+l++ K+v++ KIAA0611 196 -------------------QIIRFLLLFSNIIPISLRVNLDMGKIVYS-- 224 FInsDlemYhektDtPasvRtSNLnEeLGQVeYiFSDKTGTLTqNiMeFk + +++ +++++vR+S+++E LG++ Y++ DKTGTLTqN+M Fk KIAA0611 225 -----WVIRRDSKIPGTVVRSSTIPEQLGRISYLLTDKTGTLTQNEMIFK 269 KcsIaGvsYgSdgltevkdalrerkgskveeesakvakDknsmlnelkil +++++v+Yg d+++ev + + ++++ + + KIAA0611 270 RLHLGTVAYGLDSMDEVQSHIFSI---YTQQS------------QDPPAQ 304 ksnsqkapkgftFvdprLvkllktaknkpnakliqeFflaLAiCHtVvP. k++ l+t + ++ ++ e ++a A+CH+V+P KIAA0611 305 KGPT-----------------LTTKVRRTMSSRVHEAVKAIALCHNVTPv 337 .evnd.dddpeKGei.......tYQAaSPDEaALVkaArdlGFvfieRtp e n d e e++ +++ ++YQA+SPDE+ALV+ ++++G+++++R++ KIAA0611 338 yESNGvTDQAE-AEKqyedscrVYQASSPDEVALVQWTESVGLTLVGRDQ 386 ksIsllieerGkkGkkeekeYeiLnVlEFnSdRKRMSvIvRfPdgnPGDd s ++ G + +++ iL++++F+ +KRM++IvR+++ KIAA0611 387 S--SMQLRTPG-D---QILNFTILQIFPFTYESKRMGIIVRDEST----- 425 grilLlcKGADsVifkRLssssGsggnqvieeTkeHLenyAsEGLRTLci g+i +++KGAD V+ +++ ++++++e+++n+A+EGLR L++ KIAA0611 426 GEITFYMKGADVVMAGIVQ---------YNDWLEEECGNMAREGLRVLVV 466 AyReLseeEYeeWneeYneAstaLtedReekLdevAelIEkdLiLLGaTA A + L ee Y+ ++ +Y +A+++++ dR k+ v e++E + +LL++T+ KIAA0611 467 AKKSLAEEQYQDFEARYVQAKLSVH-DRSLKVATVIESLEMEMELLCLTG 515 IEDKLQeGVPetIElLreAGIKiWVLTGDKvETAINIGySCrLlsenMel +ED LQ++V t+E+Lr+AGIK+W+LTGDK ETA++ ++ + L+++n+ + KIAA0611 516 VEDQLQADVRPTLETLRNAGIKVWMLTGDKLETATCTAKNAHLVTRNQDI 565 ivIkeesddIrelEdagdldatervveaaikkiLkeyfelegteeefnel +v+ + +++ a + ++f+ KIAA0611 566 HVFRLVTN----------RGE------AHLE------------LNAFRRK 587 kkdhvpsgnvALvIDGksLkyaLdeeDlekeFLqLAlkCkAViCCRVSPs ++ ALvI G+sL L+ + e eF +LA++C+AV+CCR++P KIAA0611 588 HD-------CALVISGDSLEVCLKYY--EYEFMELACQCPAVVCCRCAPT 628 QKAdVVkLVKkstGrlskiTLAIGDGANDVSMIQeADVGVGIsGkEGmQA QKA++V+L r++k+T+A GDG+NDVSMIQe D GVG +GkEG+QA KIAA0611 629 QKAQIVRLLQE---RTGKLTCAVGDGGNDVSMIQESDCGVGVEGKEGKQA 675 vMASDFAIgQFrFLekLLLVHGrWSYkRiskmIlYfFYKNlifalilFWY ++A+DF+I+QF++L++LL VHGr+SYkR++ + +++ ++ l ++ +++++ KIAA0611 676 SLAADFSITQFKHLGRLLMVHGRNSYKRSAALSQFVIHRSLCISTMQAVF 725 sfyngFsGqtlyedWymvlYNvfFTalPVivLGvfDqDvsaslslryPqL s +++F +ly++ ++ +Y++++T+ PV++L v+D+Dv +++ + yP+L KIAA0611 726 SSVFYFASVPLYQGFLIIGYSTIYTMFPVFSL-VLDKDVKSEVAMLYPEL 774 YreGqkgkefstkvFwgwmldglyQSlviFffpilayklgdfvssGevdd Y+ + kg +s+k+F+ w+l+++yQ++ i+ +++l ++ + KIAA0611 775 YKDLLKGRPLSYKTFLIWVLISIYQGSTIMYGALLLFES---------E- 814 fssvGvivfTalVvvvnlkiaLeinrWnwisliaiwgSiLvwlifvivys f+++++i+fT+l+++++l++aL+i +W w + +a+ +S+ ++++++++ KIAA0611 815 FVHIVAISFTSLILTELLMVALTIQTWHWLMTVAELLSLACYIASLVFLH 864 sifptlPadisrefykaakrvmstfgFWlvLlvivlisLLPrFtykalqr + + + + t++F + + vi+l+s LP + +k+l r KIAA0611 865 EFI--------------DVYFIATLSFLWKVSVITLVSCLPLYVLKYLRR 900 lfrPtdyeiVqE<-* +f P++y ++ KIAA0611 901 RFSPPSYSKLTS 912 TIGR01494: domain 2 of 7, from 168 to 275: score 77.3, E = 1.5e-20 *->fifilfllllalsvflltligl.wtffkiflralillviaiPiaLpv +++ilf +l+++s+++++l+++ ++++ ++r+l+l++++iPi+L+v KIAA0611 168 LTKILFGALVVVSLVMVALQHFaGRWYLQIIRFLLLFSNIIPISLRV 214 avtialavgdkrma.......ilvrslnalEelGqvdyicsDKTGTLTen +++++++v+ + ++++ ++ +vrs++++E lG+++y+++DKTGTLT+n KIAA0611 215 NLDMGKIVYSWVIRrdskipgTVVRSSTIPEQLGRISYLLTDKTGTLTQN 264 kmtfkkvyigg<-* +m fk++++g+ KIAA0611 265 EMIFKRLHLGT 275 TIGR01494: domain 5 of 7, from 504 to 561: score 74.4, E = 9e-20 *->vAykeellGltaieDpLredvketIeeLkraGikvwMlTGDnveTAi + + ell+lt++eD+L++dv +t+e+L++aGikvwMlTGD++eTA KIAA0611 504 LEMEMELLCLTGVEDQLQADVRPTLETLRNAGIKVWMLTGDKLETAT 550 aIAkecglfAR<-* ++Ak +l R KIAA0611 551 CTAKNAHLVTR 561 TIGR01494: domain 6 of 7, from 621 to 737: score 129.8, E = 2.5e-36 *->lfARvsPeqKaeiVellqkr.gaiVamiGDGaNDapALkaADVGiai +++R++P+qKa+iV+llq+r+g+ ++++GDG+ND+++++++D G+++ KIAA0611 621 VCCRCAPTQKAQIVRLLQERtGKLTCAVGDGGNDVSMIQESDCGVGV 667 g......AkaaaDivltddnlslivlllvhGRwtykrikklilyalyynl +++++++A+ aaD+++t++ +l +ll+vhGR++ykr+++l +++++++l KIAA0611 668 EgkegkqASLAADFSITQF-KHLGRLLMVHGRNSYKRSAALSQFVIHRSL 716 iliillfvlsvinllftslpalal<-* +++ +++v ++ +f+++++ + KIAA0611 717 CISTMQAV---FSSVFYFASVPLY 737 //