hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07554945/chunk_1/iprscan-20080502-07554945.nocrc
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Query sequence: KIAA0608
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00566.9.fs TBC domain                                      80.7    3.8e-22   1
PF00566.9.ls TBC domain                                      81.2      3e-21   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00566.9.ls   1/1     483   714 ..     1   219 []    81.2    3e-21
PF00566.9.fs   1/1     542   714 ..    44   219 .]    80.7  3.8e-22

Alignments of top-scoring domains:
PF00566.9.ls: domain 1 of 1, from 483 to 714: score 81.2, E = 3e-21
                   *->vkeGvpsstrakVWavcsgAyqlrYAsageYerllrrgdek......
                         G p s r+kVW +  g   l+   +  Ye  l+r  e  ++ ++
    KIAA0608   483    --QGLPPSVRGKVWSLAVG-NELN-ITPELYEIFLSRAKERwksfse 525  

                   es..............qavdkIekDvkRtLvkesaFqsrGKGegiskLrr
                   +s+++++++ +  +++++ + I  D++Rt +    Fq    G+    L  
    KIAA0608   526 TSsendtegvsvadreASLELIKLDISRTFPSLYIFQ--KGGPYHDVLHS 573  

                   vLvAYswknPdvgYcQGMNVvaApfLllykSEeqAFyfLdrLlenvvPlK
                   +L AY   +PdvgY+QGM  +aA + l    E +AF  + +Ll   + l 
    KIAA0608   574 ILGAYTCYRPDVGYVQGMSFIAAVLILNL-EEADAFIAFANLLNKPCQLA 622  

                   YylpdldGvrlDqkvLdsfveellprLYeYLlskgvdlkvvsLpwfLsLy
                   ++  d    +     ++ f ee l +L+ +  s  ++ +++   w+ +Ly
    KIAA0608   623 FFRVDHSMMLKYFATFEVFFEENLSKLFLHFKSYSLTPDIYLIDWIFTLY 672  

                   attlPleeAlrIfDiLFadGivllfrvaLAvLkilkeqiLda<-*
                     +lPl+ A r++D +  dG   lfr  L +L  + + +L+    
    KIAA0608   673 SKSLPLDLACRVWDVFCRDGEEFLFRTGLGILRLYEDILLQM    714  

PF00566.9.fs: domain 1 of 1, from 542 to 714: score 80.7, E = 3.8e-22
                   *->qavdkIekDvkRtLvkesaFqsrGKGegiskLrrvLvAYswknPdvg
                      ++ + I  D++Rt +    Fq    G+    L  +L AY   +Pdvg
    KIAA0608   542    ASLELIKLDISRTFPSLYIFQ--KGGPYHDVLHSILGAYTCYRPDVG 586  

                   YcQGMNVvaApfLllykSEeqAFyfLdrLlenvvPlKYylpdldGvrlDq
                   Y+QGM  +aA + l    E +AF  + +Ll   + l ++  d    +   
    KIAA0608   587 YVQGMSFIAAVLILNL-EEADAFIAFANLLNKPCQLAFFRVDHSMMLKYF 635  

                   kvLdsfveellprLYeYLlskgvdlkvvsLpwfLsLyattlPleeAlrIf
                     ++ f ee l +L+ +  s  ++ +++   w+ +Ly  +lPl+ A r++
    KIAA0608   636 ATFEVFFEENLSKLFLHFKSYSLTPDIYLIDWIFTLYSKSLPLDLACRVW 685  

                   DiLFadGivllfrvaLAvLkilkeqiLda<-*
                   D +  dG   lfr  L +L  + + +L+    
    KIAA0608   686 DVFCRDGEEFLFRTGLGILRLYEDILLQM    714  

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