hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-06463024/chunk_1/iprscan-20080502-06463024.nocrc
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Query sequence: KIAA0569
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 171.3    9.7e-47   8
SM00389                                                  23.3     0.0014   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/8     315   338 ..     1    23 []    27.1   0.0025
SM00355      2/8     345   367 ..     1    23 []    31.5  0.00011
SM00355      3/8     386   408 ..     1    23 []    29.2  0.00055
SM00355      4/8     414   434 ..     1    23 []    10.3       22
SM00355      5/8     685   705 ..     1    23 []     6.1       64
SM00389      1/1     745   810 ..     1    63 []    23.3   0.0014
SM00355      6/8    1103  1125 ..     1    23 []    26.0   0.0053
SM00355      7/8    1131  1153 ..     1    23 []    20.4     0.26
SM00355      8/8    1159  1180 ..     1    23 []    20.6     0.21

Alignments of top-scoring domains:
SM00355: domain 1 of 8, from 315 to 338: score 27.1, E = 0.0025
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      ++Cp+ C++ +++ ++Lk+H++ +H   
    KIAA0569   315    LTCPY-CDRGYKRLtSLKEHIKyRH    338  

SM00355: domain 2 of 8, from 345 to 367: score 31.5, E = 0.00011
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + Cp+ C+++f  +++L+rHm +H   
    KIAA0569   345    FSCPL-CSYTFAYRtQLERHMVTH    367  

SM00355: domain 3 of 8, from 386 to 408: score 29.2, E = 0.00055
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC++ Cgk f+ k++Lk+H+r+H   
    KIAA0569   386    FKCTE-CGKAFKYKhHLKEHLRIH    408  

SM00355: domain 4 of 8, from 414 to 434: score 10.3, E = 22
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+Cp  C+k+fs+ +++  H+      
    KIAA0569   414    YECPN-CKKRFSHSgSYSSHIS--    434  

SM00355: domain 5 of 8, from 685 to 705: score 6.1, E = 64
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C++ C++sf+ +  L +H r     
    KIAA0569   685    FSCQF-CKESFPGPiPLHQHER--    705  

SM00389: domain 1 of 1, from 745 to 810: score 23.3, E = 0.0014
                   *->krrkRts...ftpeQleeLEkeFeknpYPsreereeLAkeLgLterq
                      + +  ts+ +  ++  ++L+++++ n+ P+++e+ +++   gL+++ 
    KIAA0569   745    SEKGMTSpinPYKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEF 791  

                   VkvWFQNRRakwkrqekkk<-*
                   Vk WF  R   +  ++++    
    KIAA0569   792 VKEWFEQRKVYQYSNSRSP    810  

SM00355: domain 6 of 8, from 1103 to 1125: score 26.0, E = 0.0053
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C++ C+k+f   ++L rH + H   
    KIAA0569  1103    YACDL-CDKTFQKSsSLLRHKYEH    1125 

SM00355: domain 7 of 8, from 1131 to 1153: score 20.4, E = 0.26
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C+i C+k f++k++L++H r H   
    KIAA0569  1131    HQCQI-CKKAFKHKhHLIEHSRLH    1153 

SM00355: domain 8 of 8, from 1159 to 1180: score 20.6, E = 0.21
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk+fs+ +++ +Hm  H   
    KIAA0569  1159    YQCDK-CGKRFSHSgSYSQHMN-H    1180 

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