hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-06413280/chunk_1/iprscan-20080502-06413280.nocrc
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Query sequence: KIAA0567
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
PF00350.13.ls Dynamin family                                207.6    2.6e-59   1
PF00350.13.fs Dynamin family                                205.8    9.4e-59   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
PF00350.13.fs   1/1     309   487 ..     1   217 []   205.8  9.4e-59
PF00350.13.ls   1/1     309   487 ..     1   217 []   207.6  2.6e-59

Alignments of top-scoring domains:
PF00350.13.fs: domain 1 of 1, from 309 to 487: score 205.8, E = 9.4e-59
                   *->IaVvGdqSsGKSSvLnaLlGrdfnLPhrgpgEptTrrplvTlqlges
                      ++VvGdqS+GK+SvL+ + ++++ +P rg+gE++Tr p++ ++l+e 
    KIAA0567   309    VVVVGDQSAGKTSVLEMIAQARI-FP-RGSGEMMTRSPVK-VTLSEG 352  

                   peaieivsipgavkveykdflhplkkfedfsevreeieketdriagknkg
                   p  ++     +  k++ ++f+  l+k+ed+ ++r+eie ++ ++  ++  
    KIAA0567   353 PH-HV-----ALFKDSSREFD--LTKEEDLAALRHEIELRMRKNVKEGCT 394  

                   isseGalakvsfgavkyCnfskpiileilsplvpgltLVDtPGldslSva
                   +s+e                   i+l++++p ++ ++LVD+PG++   + 
    KIAA0567   395 VSPE------------------TISLNVKGPGLQRMVLVDLPGVIN--TV 424  

                   vgdqqPeDieeqIrelteeyiskpadiILaVvpAnvaLdlstssdealfl
                   + ++ ++D++e I ++ ++y+++p++iIL++++ +v  d  +s   +  l
    KIAA0567   425 TSGM-APDTKETIFSISKAYMQNPNAIILCIQDGSV--DAERS--IVTDL 469  

                   arevdpkgerdktigVltKd<-*
                   +++ dp+g+r  ti+VltK+   
    KIAA0567   470 VSQMDPHGRR--TIFVLTKV    487  

PF00350.13.ls: domain 1 of 1, from 309 to 487: score 207.6, E = 2.6e-59
                   *->IaVvGdqSsGKSSvLnaLlGrdfnLPhrgpgEptTrrplvTlqlges
                      ++VvGdqS+GK+SvL+ + ++++ +P rg+gE++Tr p++ ++l+e 
    KIAA0567   309    VVVVGDQSAGKTSVLEMIAQARI-FP-RGSGEMMTRSPVK-VTLSEG 352  

                   peaieivsipgavkveykdflhplkkfedfsevreeieketdriagknkg
                   p  ++     +  k++ ++f+  l+k+ed+ ++r+eie ++ ++  ++  
    KIAA0567   353 PH-HV-----ALFKDSSREFD--LTKEEDLAALRHEIELRMRKNVKEGCT 394  

                   isseGalakvsfgavkyCnfskpiileilsplvpgltLVDtPGldslSva
                   +s+e                   i+l++++p ++ ++LVD+PG++   + 
    KIAA0567   395 VSPE------------------TISLNVKGPGLQRMVLVDLPGVIN--TV 424  

                   vgdqqPeDieeqIrelteeyiskpadiILaVvpAnvaLdlstssdealfl
                   + ++ ++D++e I ++ ++y+++p++iIL++++ +v  d  +s   +  l
    KIAA0567   425 TSGM-APDTKETIFSISKAYMQNPNAIILCIQDGSV--DAERS--IVTDL 469  

                   arevdpkgerdktigVltKd<-*
                   +++ dp+g+r  ti+VltK+   
    KIAA0567   470 VSQMDPHGRR--TIFVLTKV    487  

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