hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-06073390/chunk_1/iprscan-20080502-06073390.nocrc
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Query sequence: KIAA0547
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04072.5.fs Leucine carboxyl methyltransferase             619.8     6e-188   1
PF04072.5.ls Leucine carboxyl methyltransferase             621.6   6.1e-184   1
PF07646.5.fs Kelch motif                                     39.2    8.7e-10   5
PF07646.5.ls Kelch motif                                     29.6      1e-05   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04072.5.fs   1/1      21   323 ..     1   330 []   619.8   6e-188
PF04072.5.ls   1/1      21   323 ..     1   330 []   621.6 6.1e-184
PF07646.5.ls   2/4     490   538 ..     1    54 []    16.8    0.072

Alignments of top-scoring domains:
PF04072.5.fs: domain 1 of 1, from 21 to 323: score 619.8, E = 6e-188
                   *->rsVqrTndDaslSKAkckrfavrkgyvkDpyikfFvpkkvdkskaRr
                      ++Vq+Tnd+++    ++kr+++++gyv+Dp+++++vp+     +aRr
    KIAA0547    21    GAVQNTNDSSA----LSKRSLAARGYVQDPFAALLVPG-----AARR 58   

                   aPeINRGYyaRtvaIrhavrkFLeqttqdgPqAALkaQIVNLGaGfDtLf
                   aP+I+RGYy+R++a+rh+vr+FLeq+  ++PqAAL+aQI++LGaGfD+L+
    KIAA0547    59 APLIHRGYYVRARAVRHCVRAFLEQI--GAPQAALRAQILSLGAGFDSLY 106  

                   FRLlssgeYiqSqqYldrvkfiEvDFpevverKiehIlkesellsiilge
                   FRL+++g+       l+r++++EvDFp+v++rK+e+I++++el+  +l++
    KIAA0547   107 FRLKTAGR-------LARAAVWEVDFPDVARRKAERIGETPELC--ALTG 147  

                   skeeDyvvalsgtdLhsgsYhliGcDLRdlneleekLekcqlldanlPTi
                   ++e++  +++s+++++s++Y+++G+DLR+l+++ee+L++++ lda++PT+
    KIAA0547   148 PFERG--EPASALCFESADYCILGLDLRQLQRVEEALGAAG-LDAASPTL 194  

                   fiAECvLvYMepeeSasLikwiaskFenalfvnYEQirpsqPnDrFGkvM
                   ++AE+vL+Y+epe++a+Li+w+a++F+nalfv+YEQ+rp   +D+FG++M
    KIAA0547   195 LLAEAVLTYLEPESAAALIAWAAQRFPNALFVVYEQMRP---QDAFGQFM 241  

                   laNLkeSrgspLhGLetYesiEsQrsRFlkaGweeVivvDMneiynsflp
                   l+++++ ++spLhGLe+++++E+Qr+RFl+aGw+++++vD ne+y++flp
    KIAA0547   242 LQHFRQ-LNSPLHGLERFPDVEAQRRRFLQAGWTACGAVDINEFYHCFLP 290  

                   eaEkkRiesiEpLDElEElqllcqHYcLvhAss<-*
                   ++E++R+e+iEp+DE+EE++l+c+HY++++As+   
    KIAA0547   291 AEERRRVENIEPFDEFEEWHLKCAHYFILAASR    323  

PF04072.5.ls: domain 1 of 1, from 21 to 323: score 621.6, E = 6.1e-184
                   *->rsVqrTndDaslSKAkckrfavrkgyvkDpyikfFvpkkvdkskaRr
                      ++Vq+Tnd+++    ++kr+++++gyv+Dp+++++vp+     +aRr
    KIAA0547    21    GAVQNTNDSSA----LSKRSLAARGYVQDPFAALLVPG-----AARR 58   

                   aPeINRGYyaRtvaIrhavrkFLeqttqdgPqAALkaQIVNLGaGfDtLf
                   aP+I+RGYy+R++a+rh+vr+FLeq+  ++PqAAL+aQI++LGaGfD+L+
    KIAA0547    59 APLIHRGYYVRARAVRHCVRAFLEQI--GAPQAALRAQILSLGAGFDSLY 106  

                   FRLlssgeYiqSqqYldrvkfiEvDFpevverKiehIlkesellsiilge
                   FRL+++g+       l+r++++EvDFp+v++rK+e+I++++el+  +l++
    KIAA0547   107 FRLKTAGR-------LARAAVWEVDFPDVARRKAERIGETPELC--ALTG 147  

                   skeeDyvvalsgtdLhsgsYhliGcDLRdlneleekLekcqlldanlPTi
                   ++e++  +++s+++++s++Y+++G+DLR+l+++ee+L++++ lda++PT+
    KIAA0547   148 PFERG--EPASALCFESADYCILGLDLRQLQRVEEALGAAG-LDAASPTL 194  

                   fiAECvLvYMepeeSasLikwiaskFenalfvnYEQirpsqPnDrFGkvM
                   ++AE+vL+Y+epe++a+Li+w+a++F+nalfv+YEQ+rp   +D+FG++M
    KIAA0547   195 LLAEAVLTYLEPESAAALIAWAAQRFPNALFVVYEQMRP---QDAFGQFM 241  

                   laNLkeSrgspLhGLetYesiEsQrsRFlkaGweeVivvDMneiynsflp
                   l+++++ ++spLhGLe+++++E+Qr+RFl+aGw+++++vD ne+y++flp
    KIAA0547   242 LQHFRQ-LNSPLHGLERFPDVEAQRRRFLQAGWTACGAVDINEFYHCFLP 290  

                   eaEkkRiesiEpLDElEElqllcqHYcLvhAss<-*
                   ++E++R+e+iEp+DE+EE++l+c+HY++++As+   
    KIAA0547   291 AEERRRVENIEPFDEFEEWHLKCAHYFILAASR    323  

PF07646.5.ls: domain 2 of 4, from 490 to 538: score 16.8, E = 0.072
                   *->pryphasvvp..ggklyvvGGsfkgnrgtgngdesssdllvldpetn
                      +r++++ v++++++ l+v+GG+           +++sd+++l+  t 
    KIAA0547   490    WRHSTTEVSCqnQEYLFVYGGR-------SVVEPVLSDWHFLHVGTM 529  

                   vWeklpalp<-*
                   +W ++p+ +   
    KIAA0547   530 AWVRIPVEG    538  

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