hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05171952/chunk_1/iprscan-20080502-05171952.nocrc
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Query sequence: KIAA0518
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00353                                                  38.7    7.6e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00353    1/1      14    65 ..     1    61 []    38.7  7.6e-07

Alignments of top-scoring domains:
SM00353: domain 1 of 1, from 14 to 65: score 38.7, E = 7.6e-07
                   *->narERrlrRRekiNeqafdeLrslvPtlpkgggnskKlsKasiLrlA
                      +a ER  rRR ++++  f++L+  +  l+     s+K+sK  iL +A
    KIAA0518    14    TANER--RRRGEMRD-LFEKLKITLGLLH-----SSKVSKSLILTRA 52   

                   ieYIrksLqeqlqe<-*
                    + I + L +q ++   
    KIAA0518    53 FSEI-QGLTDQADK    65   

//