hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-05053756/chunk_1/iprscan-20080502-05053756.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0511 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00211.10.ls Adenylate and Guanylate cyclase catalyt 662.0 4.5e-196 2 PF00211.10.fs Adenylate and Guanylate cyclase catalyt 658.3 5.7e-195 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00211.10.fs 1/2 99 283 .. 1 223 [] 316.0 6e-92 PF00211.10.ls 1/2 99 283 .. 1 223 [] 317.9 1.7e-92 PF00211.10.fs 2/2 703 910 .. 1 223 [] 342.2 7.9e-100 PF00211.10.ls 2/2 703 910 .. 1 223 [] 344.1 2.2e-100 Alignments of top-scoring domains: PF00211.10.fs: domain 1 of 2, from 99 to 283: score 316.0, E = 6e-92 *->vyaqrydnVtilFaDIvGFTalssrhsvNngpeevvrlLNdlytrFD +y++r++nV+ilFaDIvGFT+lss++s ++e+v+lLN+l++rFD KIAA0511 99 MYMYRHENVSILFADIVGFTQLSSACS----AQELVKLLNELFARFD 141 eLldehkfgvyKvKTIGDaYMvasGlppaadqtkLakklqldsaaHaakl +L++++ + ++K++GD+Y++++Glp + +++Ha+++ KIAA0511 142 KLAAKY--HQLRIKILGDCYYCICGLPDY-------------REDHAVCS 176 admALdmveaiqevnvehanrepPtvLyrGlrvRiGiHtGpVvaGviGlt + m+L+mveai++v+++++ + +R+G+HtG+V+ Gv+G KIAA0511 177 ILMGLAMVEAISYVREKTKT--G-------VDMRVGVHTGTVLGGVLG-- 215 akrprYdvwGdTVNlASRmEStGvpgsekIhvseetyrlLkeeesfefef +kr++Ydvw+ +V++A++mE++G+pg ++h+s++t+++Lk+e+++e++ KIAA0511 216 QKRWQYDVWSTDVTVANKMEAGGIPG--RVHISQSTMDCLKGEFDVEPG- 262 aleprgeveVkGkgkpGeietYfLkg<-* ++g+++ + +k+ ietY++++ KIAA0511 263 ---DGGSRCDYLEEKG--IETYLIIA 283 PF00211.10.ls: domain 1 of 2, from 99 to 283: score 317.9, E = 1.7e-92 *->vyaqrydnVtilFaDIvGFTalssrhsvNngpeevvrlLNdlytrFD +y++r++nV+ilFaDIvGFT+lss++s ++e+v+lLN+l++rFD KIAA0511 99 MYMYRHENVSILFADIVGFTQLSSACS----AQELVKLLNELFARFD 141 eLldehkfgvyKvKTIGDaYMvasGlppaadqtkLakklqldsaaHaakl +L++++ + ++K++GD+Y++++Glp + +++Ha+++ KIAA0511 142 KLAAKY--HQLRIKILGDCYYCICGLPDY-------------REDHAVCS 176 admALdmveaiqevnvehanrepPtvLyrGlrvRiGiHtGpVvaGviGlt + m+L+mveai++v+++++ + +R+G+HtG+V+ Gv+G KIAA0511 177 ILMGLAMVEAISYVREKTKT--G-------VDMRVGVHTGTVLGGVLG-- 215 akrprYdvwGdTVNlASRmEStGvpgsekIhvseetyrlLkeeesfefef +kr++Ydvw+ +V++A++mE++G+pg ++h+s++t+++Lk+e+++e++ KIAA0511 216 QKRWQYDVWSTDVTVANKMEAGGIPG--RVHISQSTMDCLKGEFDVEPG- 262 aleprgeveVkGkgkpGeietYfLkg<-* ++g+++ + +k+ ietY++++ KIAA0511 263 ---DGGSRCDYLEEKG--IETYLIIA 283 PF00211.10.fs: domain 2 of 2, from 703 to 910: score 342.2, E = 7.9e-100 *->vyaqrydnVtilFaDIvGFTalssrhsvNngpeevvrlLNdlytrFD +y+q yd+++++Fa++++F++++++ s+Nng++e++r+LN+++++FD KIAA0511 703 LYSQTYDEIGVMFASLPNFADFYTEESINNGGIECLRFLNEIISDFD 749 eLldehkf.gvyKvKTIGDaYMvasGlppaadqt......kLakklqlds +Lld++kf+ ++K+KTIG++YM+asG++p++++ + +++k + k+ ++ KIAA0511 750 SLLDNPKFrVITKIKTIGSTYMAASGVTPDVNTNgfassnK-EDKSERER 798 aaHaakladmALdmveaiqevnvehanrepPtvLyrGlrvRiGiHtGpVv ++H+a+lad+AL+m+++++ +n++++n + +++RiG++ G V+ KIAA0511 799 WQHLADLADFALAMKDTLTNINNQSFN--N-------FMLRIGMNKGGVL 839 aGviGltakrprYdvwGdTVNlASRmEStGvpgsekIhvseetyrlLkee aGviG a++p+Yd+wG+TVN+ASRmEStGv+g +I+v eet +L+e+ KIAA0511 840 AGVIG--ARKPHYDIWGNTVNVASRMESTGVMG--NIQVVEETQVILREY 885 esfefefaleprgeveVkGkgkpGeietYfLkg<-* + f+f + rg+++VkGkg+ + t+fLkg KIAA0511 886 G-FRFVR----RGPIFVKGKGE---LLTFFLKG 910 PF00211.10.ls: domain 2 of 2, from 703 to 910: score 344.1, E = 2.2e-100 *->vyaqrydnVtilFaDIvGFTalssrhsvNngpeevvrlLNdlytrFD +y+q yd+++++Fa++++F++++++ s+Nng++e++r+LN+++++FD KIAA0511 703 LYSQTYDEIGVMFASLPNFADFYTEESINNGGIECLRFLNEIISDFD 749 eLldehkf.gvyKvKTIGDaYMvasGlppaadqt......kLakklqlds +Lld++kf+ ++K+KTIG++YM+asG++p++++ + +++k + k+ ++ KIAA0511 750 SLLDNPKFrVITKIKTIGSTYMAASGVTPDVNTNgfassnK-EDKSERER 798 aaHaakladmALdmveaiqevnvehanrepPtvLyrGlrvRiGiHtGpVv ++H+a+lad+AL+m+++++ +n++++n + +++RiG++ G V+ KIAA0511 799 WQHLADLADFALAMKDTLTNINNQSFN--N-------FMLRIGMNKGGVL 839 aGviGltakrprYdvwGdTVNlASRmEStGvpgsekIhvseetyrlLkee aGviG a++p+Yd+wG+TVN+ASRmEStGv+g +I+v eet +L+e+ KIAA0511 840 AGVIG--ARKPHYDIWGNTVNVASRMESTGVMG--NIQVVEETQVILREY 885 esfefefaleprgeveVkGkgkpGeietYfLkg<-* + f+f + rg+++VkGkg+ + t+fLkg KIAA0511 886 G-FRFVR----RGPIFVKGKGE---LLTFFLKG 910 //