hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-04125689/chunk_1/iprscan-20080502-04125689.nocrc
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Query sequence: KIAA0479
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleo   111.7      7e-31   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
TIGR00482   1/1      45   335 ..     1   229 []   111.7    7e-31

Alignments of top-scoring domains:
TIGR00482: domain 1 of 1, from 45 to 335: score 111.7, E = 7e-31
                   *->LFGGsFDPiHyGHlllAeealeald.ldkvifvPtfnpPhKkteela
                      L++GsF+Pi+ GH+ ++e+a ++l++++++i++ ++++P+ ++++++
    KIAA0479    45    LACGSFNPITKGHIQMFERARDYLHkTGRFIVIGGIVSPVHDSYGKQ 91   

                   sdLAssehRlaMlklAieneTnpkfeVsdfEikrggpsYTidTLkhlkkk
                    +L ss+hRl M++lA++n  +++++V+++E  +  +  T  +L+h++ +
    KIAA0479    92 -GLVSSRHRLIMCQLAVQN--SDWIRVDPWECYQDTWQTTCSVLEHHRDL 138  

                   yp................................................
                    ++ ++   ++ ++++ ++  ++++++++++  ++++  ++++  +  ++
    KIAA0479   139 MKrvtgcilsnvntpsmtpvigqpqnetpqpiyqnsnvatkptaakilgk 188  

                   ..........................gGA.v.tpdsevklyfiiGaDalr
                    +++ ++    +++ ++ +  +++ + G  ++ ++ e  + +++G D+l+
    KIAA0479   189 vgeslsriccvrppverftfvdenanLGTvMrYEEIELRILLLCGSDLLE 238  

                   sfp.PNkWkDAdweeLlelvelVvvpRpgyeldkallekaiqllksrldq
                   sf  P +W  Ad e ++  +++VvvpR     d a+ +  ++ + s +  
    KIAA0479   239 SFCiPGLWNEADMEVIVGDFGIVVVPR-----DAADTD--RIMNHSSI-- 279  

                   lpadLklrthkrnlvllegdv.lprvnISSTeIRkriregk.sieyLlPe
                         lr +k n++ +++d++ p   +SST+ R +++ g +++ + l  
    KIAA0479   280 ------LRKYKNNIMVVKDDInHPMSVVSSTKSRLALQHGDgHVVDYLSQ 323  

                   pVlkYIkehgLY<-*
                   pV+ YI + +LY   
    KIAA0479   324 PVIDYILKSQLY    335  

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