# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/fj12051.fasta.nr -Q ../query/KIAA0474.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0474, 782 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7825064 sequences Expectation_n fit: rho(ln(x))= 5.5846+/-0.000188; mu= 11.5676+/- 0.011 mean_var=83.0893+/-15.880, 0's: 35 Z-trim: 43 B-trim: 23 in 1/65 Lambda= 0.140702 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|108998965|ref|XP_001109771.1| PREDICTED: RAP1, (1242) 4660 956.2 0 gi|109475701|ref|XP_233609.4| PREDICTED: similar t ( 753) 4618 947.6 0 gi|168273006|dbj|BAG10342.1| Rap1 GTPase-activatin ( 681) 4537 931.1 0 gi|119615385|gb|EAW94979.1| RAP1, GTPase activatin ( 689) 4511 925.8 0 gi|55729452|emb|CAH91457.1| hypothetical protein [ ( 804) 3698 760.8 0 gi|119615387|gb|EAW94981.1| RAP1, GTPase activatin ( 727) 3669 754.9 2.5e-215 gi|124487211|ref|NP_001074624.1| Rap1 GTPase-activ ( 727) 3524 725.5 1.8e-206 gi|123229439|emb|CAM19420.1| Rap1 GTPase-activatin ( 729) 3519 724.5 3.7e-206 gi|149024348|gb|EDL80845.1| RAP1, GTPase activatin ( 727) 3518 724.3 4.2e-206 gi|119615389|gb|EAW94983.1| RAP1, GTPase activatin ( 617) 3380 696.2 1e-197 gi|119615390|gb|EAW94984.1| RAP1, GTPase activatin ( 694) 3377 695.6 1.7e-197 gi|71296783|gb|AAH35030.1| RAP1GAP protein [Homo s ( 692) 3362 692.6 1.4e-196 gi|55959690|emb|CAI16255.1| RAP1 GTPase activating ( 693) 3358 691.8 2.4e-196 gi|149024349|gb|EDL80846.1| RAP1, GTPase activatin ( 693) 3343 688.7 2e-195 gi|215273877|sp|P47736.2|RPGP1_HUMAN RecName: Full ( 663) 3336 687.3 5.2e-195 gi|123229440|emb|CAM19421.1| Rap1 GTPase-activatin ( 694) 3336 687.3 5.4e-195 gi|190856|gb|AAA60252.1| GTPase activating protein ( 663) 3331 686.3 1.1e-194 gi|32452014|gb|AAH54490.1| RAP1 GTPase activating ( 663) 3329 685.9 1.4e-194 gi|115304761|gb|AAI23396.1| RAP1 GTPase activating ( 663) 3298 679.6 1.1e-192 gi|55731989|emb|CAH92703.1| hypothetical protein [ ( 625) 3294 678.7 1.8e-192 gi|30354392|gb|AAH52065.1| Rap1gap protein [Mus mu ( 656) 3232 666.2 1.2e-188 gi|169642403|gb|AAI60660.1| Zgc:175180 protein [Da ( 695) 3213 662.3 1.8e-187 gi|148697964|gb|EDL29911.1| mCG120453, isoform CRA ( 489) 2991 617.2 4.9e-174 gi|148697965|gb|EDL29912.1| mCG120453, isoform CRA ( 458) 2950 608.8 1.5e-171 gi|149517546|ref|XP_001517102.1| PREDICTED: simila ( 499) 2918 602.3 1.5e-169 gi|123229442|emb|CAM19423.1| Rap1 GTPase-activatin ( 405) 2483 514.0 4.7e-143 gi|73950650|ref|XP_855199.1| PREDICTED: similar to ( 450) 2482 513.8 5.9e-143 gi|49259129|pdb|1SRQ|A Chain A, Crystal Structure ( 341) 2282 473.1 7.9e-131 gi|169791851|pdb|3BRW|A Chain A, Structure Of The ( 341) 2274 471.5 2.4e-130 gi|5650776|gb|AAD45946.1|AF151966_1 GTPase activat ( 556) 2268 470.4 8.3e-130 gi|53126175|emb|CAG30935.1| hypothetical protein [ ( 751) 1983 412.7 2.7e-112 gi|162416276|sp|Q5ZMV8.2|RPGP2_CHICK RecName: Full ( 730) 1976 411.2 7.1e-112 gi|47220760|emb|CAG11829.1| unnamed protein produc ( 467) 1856 386.7 1.1e-104 gi|73967387|ref|XP_548324.2| PREDICTED: similar to ( 916) 1842 384.1 1.3e-103 gi|162416269|sp|Q684P5.2|RPGP2_HUMAN RecName: Full ( 730) 1838 383.2 1.9e-103 gi|51869677|emb|CAF31652.1| Rap1 GTPase activating ( 730) 1832 382.0 4.5e-103 gi|119610934|gb|EAW90528.1| GTPase activating Rap/ ( 675) 1811 377.7 8.1e-102 gi|34530484|dbj|BAC85912.1| unnamed protein produc ( 711) 1808 377.1 1.3e-101 gi|81862523|sp|Q5SVL6.1|RPGP2_MOUSE RecName: Full= ( 712) 1794 374.3 9.3e-101 gi|47204365|emb|CAG14305.1| unnamed protein produc ( 314) 1778 370.8 4.6e-100 gi|50949940|emb|CAH10514.1| hypothetical protein [ ( 715) 1777 370.8 1e-99 gi|156086740|ref|NP_001093868.1| GTPase activating ( 715) 1777 370.8 1e-99 gi|51869679|emb|CAF31653.1| Rap1 GTPase activating ( 715) 1771 369.6 2.4e-99 gi|210084902|gb|EEA33401.1| hypothetical protein B ( 784) 1762 367.8 9e-99 gi|55959693|emb|CAI16258.1| RAP1 GTPase activating ( 268) 1735 362.0 1.7e-97 gi|194217443|ref|XP_001502535.2| PREDICTED: simila ( 775) 1689 353.0 2.6e-94 gi|21410877|gb|AAH30891.1| Rap1gap protein [Mus mu ( 423) 1672 349.4 1.8e-93 gi|149637553|ref|XP_001510893.1| PREDICTED: hypoth (1134) 1672 349.7 3.8e-93 gi|126631803|gb|AAI33819.1| Zgc:153898 protein [Da ( 472) 1664 347.8 5.9e-93 gi|189534018|ref|XP_001920828.1| PREDICTED: simila ( 707) 1650 345.1 5.8e-92 >>gi|108998965|ref|XP_001109771.1| PREDICTED: RAP1, GTPa (1242 aa) initn: 4647 init1: 4647 opt: 4660 Z-score: 5105.9 bits: 956.2 E(): 0 Smith-Waterman score: 4896; 93.932% identity (95.575% similar) in 791 aa overlap (2-780:120-910) 10 20 KIAA04 RAPECR---AQDAPGPGPWVNTSANRGHPPS .: : ... : :::::::::::: gi|108 KLPGASRSVGSTSSPAAPLCTHPPGYQGSLSPGCSFAAPEESDLPTLLVNTSANRGHPPS 90 100 110 120 130 140 30 40 50 60 70 80 KIAA04 DPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRVNLVPSY :: ::::::::: :::::::::::::::: ::::::::::::.:::::::::::::::: gi|108 GPHLEEADPSSNSGIATEQPYNFWVDKSFTPRRSVWRSDGQNQRFPQALDLSRVNLVPSY 150 160 170 180 190 200 90 100 110 120 130 140 KIAA04 TPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 TPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLIL 210 220 230 240 250 260 150 160 170 180 190 200 KIAA04 LPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|108 LPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDT 270 280 290 300 310 320 210 220 230 240 250 260 KIAA04 ALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 ALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVD 330 340 350 360 370 380 270 280 290 300 310 320 KIAA04 RFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 RFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFL 390 400 410 420 430 440 330 340 350 360 370 380 KIAA04 GQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 GQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRH 450 460 470 480 490 500 390 400 410 420 430 440 KIAA04 IGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 IGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGP 510 520 530 540 550 560 450 460 470 480 490 500 KIAA04 PLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 PLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQS 570 580 590 600 610 620 510 520 530 540 550 560 KIAA04 MMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 MMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNN 630 640 650 660 670 680 570 580 590 600 610 620 KIAA04 PDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGSRRSSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 PDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGSRRSSAI 690 700 710 720 730 740 630 640 650 660 670 680 KIAA04 GIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEA ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|108 GIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETATQRAEA 750 760 770 780 790 800 690 700 710 720 730 KIAA04 LKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKR---------DSFIYSTW ::::::::::::::::::::::::::::::: :.. :. :.. .: gi|108 LKDFSRSSSSASSFASVVEETEGVDGEDTGLVRGSGGRGLHRSLEGGSLLPGDALSRTTS 810 820 830 840 850 860 740 750 760 770 780 KIAA04 LEDSVSTTSGGSSPDAGKLGDPACPEIKIQLEASEQHMPQLGC : ::::::::::::::::::::::::::::::::::::::: gi|108 LGDSVSTTSGGSSPDAGKLGDPACPEIKIQLEASEQHMPQLMRPQKHKGKVPCQAQADGT 870 880 890 900 910 920 gi|108 SALKTNTSLAEPSRPGIGEAAGIIPTPSLGVRAGAGIAQWKQDWGPGLGPPRASITPEHP 930 940 950 960 970 980 >>gi|109475701|ref|XP_233609.4| PREDICTED: similar to Ra (753 aa) initn: 4470 init1: 4470 opt: 4618 Z-score: 5062.9 bits: 947.6 E(): 0 Smith-Waterman score: 4618; 93.631% identity (97.290% similar) in 738 aa overlap (53-782:16-753) 30 40 50 60 70 80 KIAA04 RGHPPSDPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRV :::::. :.::::::::.. :::.:.. : gi|109 MSGRKRSFTFGAYGGVDKSFSPRQSVWRSDGQKHSFPQTLNVLLV 10 20 30 40 90 100 110 120 130 140 KIAA04 NLVPSYTPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG . :::. : :::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DSVPSHPASPYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG 50 60 70 80 90 100 150 160 170 180 190 200 KIAA04 PFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|109 PFPLILLPQFGGYWIEGTNHEISSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN 110 120 130 140 150 160 210 220 230 240 250 260 KIAA04 YYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVC :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVC 170 180 190 200 210 220 270 280 290 300 310 320 KIAA04 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV 230 240 250 260 270 280 330 340 350 360 370 380 KIAA04 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ 290 300 310 320 330 340 390 400 410 420 430 440 KIAA04 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD 350 360 370 380 390 400 450 460 470 480 490 500 KIAA04 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL 410 420 430 440 450 460 510 520 530 540 550 560 KIAA04 HIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|109 HIHSQSMMGLGGDDDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG 470 480 490 500 510 520 570 580 590 600 610 620 KIAA04 SFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGS ::.::::::::::::::::::::::::::::::.:::.:::::::::::::::::::::: gi|109 SFTPNNPDLAKAAGISLLIPGKSASRFGRRGSALGIGAVEESLIVPGKSPTRKKSGPFGS 530 540 550 560 570 580 630 640 650 660 670 680 KIAA04 RRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:.: gi|109 RRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRVESA 590 600 610 620 630 640 690 700 710 720 730 740 KIAA04 AQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLED :::.:.:. :::::::::::.:::::::::::.:::.:::::::::::::::.:::::.: gi|109 AQRTEVLQGFSRSSSSASSFTSVVEETEGVDGDDTGMESVSSSGTPHKRDSFLYSTWLDD 650 660 670 680 690 700 750 760 770 780 KIAA04 SVSTTSGGSSP--------DAGKLGDPACPEIKIQLEASEQHMPQLGC ::::::::::: :: : :::::::::::::.:::: ::.:: gi|109 SVSTTSGGSSPGLTRSPHPDAVKSGDPACPEIKIQLETSEQHTPQMGC 710 720 730 740 750 >>gi|168273006|dbj|BAG10342.1| Rap1 GTPase-activating pr (681 aa) initn: 4537 init1: 4537 opt: 4537 Z-score: 4974.7 bits: 931.1 E(): 0 Smith-Waterman score: 4537; 100.000% identity (100.000% similar) in 681 aa overlap (102-782:1-681) 80 90 100 110 120 130 KIAA04 HFPQALDLSRVNLVPSYTPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPY :::::::::::::::::::::::::::::: gi|168 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPY 10 20 30 140 150 160 170 180 190 KIAA04 PSVHEVLGREGPFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PSVHEVLGREGPFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIY 40 50 60 70 80 90 200 210 220 230 240 250 KIAA04 RKHFLGKEHFNYYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RKHFLGKEHFNYYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEF 100 110 120 130 140 150 260 270 280 290 300 310 KIAA04 PNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEEL 160 170 180 190 200 210 320 330 340 350 360 370 KIAA04 FSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 FSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVST 220 230 240 250 260 270 380 390 400 410 420 430 KIAA04 KLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 KLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGP 280 290 300 310 320 330 440 450 460 470 480 490 KIAA04 LYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTR 340 350 360 370 380 390 500 510 520 530 540 550 KIAA04 AALLETLYEELHIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 AALLETLYEELHIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNK 400 410 420 430 440 450 560 570 580 590 600 610 KIAA04 KPNTVSTSHSGSFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 KPNTVSTSHSGSFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKS 460 470 480 490 500 510 620 630 640 650 660 670 KIAA04 PTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPE 520 530 540 550 560 570 680 690 700 710 720 730 KIAA04 MPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKR 580 590 600 610 620 630 740 750 760 770 780 KIAA04 DSFIYSTWLEDSVSTTSGGSSPDAGKLGDPACPEIKIQLEASEQHMPQLGC ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 DSFIYSTWLEDSVSTTSGGSSPDAGKLGDPACPEIKIQLEASEQHMPQLGC 640 650 660 670 680 >>gi|119615385|gb|EAW94979.1| RAP1, GTPase activating pr (689 aa) initn: 4370 init1: 4329 opt: 4511 Z-score: 4946.1 bits: 925.8 E(): 0 Smith-Waterman score: 4511; 98.839% identity (98.839% similar) in 689 aa overlap (102-782:1-689) 80 90 100 110 120 130 KIAA04 HFPQALDLSRVNLVPSYTPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPY :::::::::::::::::::::::::::::: gi|119 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPY 10 20 30 140 150 160 170 180 190 KIAA04 PSVHEVLGREGPFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSVHEVLGREGPFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIY 40 50 60 70 80 90 200 210 220 230 240 250 KIAA04 RKHFLGKEHFNYYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RKHFLGKEHFNYYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEF 100 110 120 130 140 150 260 270 280 290 300 310 KIAA04 PNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEEL 160 170 180 190 200 210 320 330 340 350 360 370 KIAA04 FSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVST 220 230 240 250 260 270 380 390 400 410 420 430 KIAA04 KLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGP 280 290 300 310 320 330 440 450 460 470 480 490 KIAA04 LYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTR 340 350 360 370 380 390 500 510 520 530 540 550 KIAA04 AALLETLYEELHIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AALLETLYEELHIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNK 400 410 420 430 440 450 560 570 580 590 600 610 KIAA04 KPNTVSTSHSGSFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KPNTVSTSHSGSFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKS 460 470 480 490 500 510 620 630 640 650 660 670 KIAA04 PTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPE 520 530 540 550 560 570 680 690 700 710 720 730 KIAA04 MPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKR 580 590 600 610 620 630 740 750 760 770 780 KIAA04 DSFIYSTWLEDSVSTTSGGSSP--------DAGKLGDPACPEIKIQLEASEQHMPQLGC :::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|119 DSFIYSTWLEDSVSTTSGGSSPGPSRSPHPDAGKLGDPACPEIKIQLEASEQHMPQLGC 640 650 660 670 680 >>gi|55729452|emb|CAH91457.1| hypothetical protein [Pong (804 aa) initn: 3722 init1: 3695 opt: 3698 Z-score: 4053.2 bits: 760.8 E(): 0 Smith-Waterman score: 3698; 93.355% identity (95.349% similar) in 602 aa overlap (53-653:16-609) 30 40 50 60 70 80 KIAA04 RGHPPSDPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRV :::::::::::::::::::::::::::::: gi|557 MSGRKRSFTFGAYGGVDKSFTSRRSVWRSDGQNQHFPQALDLSRV 10 20 30 40 90 100 110 120 130 140 KIAA04 NLVPSYTPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 NLVPSYTPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG 50 60 70 80 90 100 150 160 170 180 190 200 KIAA04 PFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|557 PFPLILLPQFGGYWIEGTNREITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN 110 120 130 140 150 160 210 220 230 240 250 260 KIAA04 YYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVC :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 YYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVC 170 180 190 200 210 220 270 280 290 300 310 320 KIAA04 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV 230 240 250 260 270 280 330 340 350 360 370 380 KIAA04 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ 290 300 310 320 330 340 390 400 410 420 430 440 KIAA04 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD 350 360 370 380 390 400 450 460 470 480 490 500 KIAA04 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL 410 420 430 440 450 460 510 520 530 540 550 560 KIAA04 HIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 HIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG 470 480 490 500 510 520 570 580 590 600 610 620 KIAA04 SFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGS ::::::::::::::::::::::::::::::::::::::::: ..: : . . . : gi|557 SFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEE-VVVRGAAGSGGCLHALFS 530 540 550 560 570 580 630 640 650 660 670 680 KIAA04 RRSSAIGIENIQEVQEKRESP-PAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAET ::. : .: .: .: : :: .: gi|557 ARSQDGG--HIGDV-----APLPPGQAPGRAGWSGGSSDGTQHLLWGLVPVPEPVPLTRG 590 600 610 620 630 690 700 710 720 730 740 KIAA04 AAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLE gi|557 FWPCLGPPGPWPSPCQDPVPKGPTPSRTSPNIAGLHGAPSLSSALTPPPRHELTWGPTPS 640 650 660 670 680 690 >>gi|119615387|gb|EAW94981.1| RAP1, GTPase activating pr (727 aa) initn: 4539 init1: 3598 opt: 3669 Z-score: 4022.0 bits: 754.9 E(): 2.5e-215 Smith-Waterman score: 4620; 95.393% identity (95.393% similar) in 738 aa overlap (53-782:16-727) 30 40 50 60 70 80 KIAA04 RGHPPSDPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRV :::::::::::::::::::::::::::::: gi|119 MSGRKRSFTFGAYGGVDKSFTSRRSVWRSDGQNQHFPQALDLSRV 10 20 30 40 90 100 110 120 130 140 KIAA04 NLVPSYTPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NLVPSYTPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG 50 60 70 80 90 100 150 160 170 180 190 200 KIAA04 PFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN 110 120 130 140 150 160 210 220 230 240 250 260 KIAA04 YYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVC 170 180 190 200 210 220 270 280 290 300 310 320 KIAA04 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV 230 240 250 260 270 280 330 340 350 360 370 380 KIAA04 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ 290 300 310 320 330 340 390 400 410 420 430 440 KIAA04 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD 350 360 370 380 390 400 450 460 470 480 490 500 KIAA04 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL 410 420 430 440 450 460 510 520 530 540 550 560 KIAA04 HIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG 470 480 490 500 510 520 570 580 590 600 610 620 KIAA04 SFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGS ::::::::::::::::: ::::::::::::::::: gi|119 SFAPNNPDLAKAAGISL--------------------------IVPGKSPTRKKSGPFGS 530 540 550 630 640 650 660 670 680 KIAA04 RRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETA 560 570 580 590 600 610 690 700 710 720 730 740 KIAA04 AQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLED 620 630 640 650 660 670 750 760 770 780 KIAA04 SVSTTSGGSSP--------DAGKLGDPACPEIKIQLEASEQHMPQLGC ::::::::::: ::::::::::::::::::::::::::::: gi|119 SVSTTSGGSSPGPSRSPHPDAGKLGDPACPEIKIQLEASEQHMPQLGC 680 690 700 710 720 >>gi|124487211|ref|NP_001074624.1| Rap1 GTPase-activatin (727 aa) initn: 3645 init1: 3468 opt: 3524 Z-score: 3863.0 bits: 725.5 E(): 1.8e-206 Smith-Waterman score: 4415; 90.650% identity (93.902% similar) in 738 aa overlap (53-782:16-727) 30 40 50 60 70 80 KIAA04 RGHPPSDPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRV :::::. :.::::::::.: :::::.: : gi|124 MSGRKRSFTFGAYGGVDKSFSLRQSVWRSDGQKQSFPQALNLLLV 10 20 30 40 90 100 110 120 130 140 KIAA04 NLVPSYTPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG . :::. : :::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 DSVPSHPASPYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG 50 60 70 80 90 100 150 160 170 180 190 200 KIAA04 PFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN ::::::::::::::::::::::.:.::::::::::::::::::::::::::::::::::: gi|124 PFPLILLPQFGGYWIEGTNHEISSLPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN 110 120 130 140 150 160 210 220 230 240 250 260 KIAA04 YYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVC :::::.::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|124 YYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTHHDVIPISCLTEFPNVVQMAKLVC 170 180 190 200 210 220 270 280 290 300 310 320 KIAA04 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV 230 240 250 260 270 280 330 340 350 360 370 380 KIAA04 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ 290 300 310 320 330 340 390 400 410 420 430 440 KIAA04 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD 350 360 370 380 390 400 450 460 470 480 490 500 KIAA04 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL 410 420 430 440 450 460 510 520 530 540 550 560 KIAA04 HIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|124 HIHSQSMMGLGGDDDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG 470 480 490 500 510 520 570 580 590 600 610 620 KIAA04 SFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGS ::.:::::::::::::: ::::::::::::::::: gi|124 SFTPNNPDLAKAAGISL--------------------------IVPGKSPTRKKSGPFGS 530 540 550 630 640 650 660 670 680 KIAA04 RRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:.: gi|124 RRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRVESA 560 570 580 590 600 610 690 700 710 720 730 740 KIAA04 AQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLED :::.:.:. :::::::::::.:::::::::::.:::::::::::::::::::.:::::.: gi|124 AQRTEVLQGFSRSSSSASSFTSVVEETEGVDGDDTGLESVSSSGTPHKRDSFLYSTWLDD 620 630 640 650 660 670 750 760 770 780 KIAA04 SVSTTSGGSSP--------DAGKLGDPACPEIKIQLEASEQHMPQLGC ::::::::::: :.:: :::::::::::::.:::: ::.:: gi|124 SVSTTSGGSSPGLTRSPHPDVGKSGDPACPEIKIQLETSEQHTPQMGC 680 690 700 710 720 >>gi|123229439|emb|CAM19420.1| Rap1 GTPase-activating pr (729 aa) initn: 3468 init1: 3468 opt: 3519 Z-score: 3857.5 bits: 724.5 E(): 3.7e-206 Smith-Waterman score: 4055; 90.574% identity (94.109% similar) in 679 aa overlap (53-731:16-668) 30 40 50 60 70 80 KIAA04 RGHPPSDPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRV :::::. :.::::::::.: :::::.: : gi|123 MSGRKRSFTFGAYGGVDKSFSLRQSVWRSDGQKQSFPQALNLLLV 10 20 30 40 90 100 110 120 130 140 KIAA04 NLVPSYTPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG . :::. : :::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 DSVPSHPASPYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG 50 60 70 80 90 100 150 160 170 180 190 200 KIAA04 PFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN ::::::::::::::::::::::.:.::::::::::::::::::::::::::::::::::: gi|123 PFPLILLPQFGGYWIEGTNHEISSLPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN 110 120 130 140 150 160 210 220 230 240 250 260 KIAA04 YYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVC :::::.::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|123 YYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTHHDVIPISCLTEFPNVVQMAKLVC 170 180 190 200 210 220 270 280 290 300 310 320 KIAA04 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV 230 240 250 260 270 280 330 340 350 360 370 380 KIAA04 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ 290 300 310 320 330 340 390 400 410 420 430 440 KIAA04 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD 350 360 370 380 390 400 450 460 470 480 490 500 KIAA04 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL 410 420 430 440 450 460 510 520 530 540 550 560 KIAA04 HIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|123 HIHSQSMMGLGGDDDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG 470 480 490 500 510 520 570 580 590 600 610 620 KIAA04 SFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGS ::.:::::::::::: ::::::::::::::::::: gi|123 SFTPNNPDLAKAAGI--------------------------SLIVPGKSPTRKKSGPFGS 530 540 550 630 640 650 660 670 680 KIAA04 RRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:.: gi|123 RRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRVESA 560 570 580 590 600 610 690 700 710 720 730 740 KIAA04 AQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLED :::.:.:. :::::::::::.:::::::::::.::::. .. . :.: gi|123 AQRTEVLQGFSRSSSSASSFTSVVEETEGVDGDDTGLHMAGRQREHHERGQLPSEVAPSC 620 630 640 650 660 670 750 760 770 780 KIAA04 SVSTTSGGSSPDAGKLGDPACPEIKIQLEASEQHMPQLGC gi|123 PPSQASHGHPTQTSASRGTLRVPRSRSNWKHLSSTHPRWAASCHLISRRD 680 690 700 710 720 >>gi|149024348|gb|EDL80845.1| RAP1, GTPase activating pr (727 aa) initn: 3634 init1: 3464 opt: 3518 Z-score: 3856.4 bits: 724.3 E(): 4.2e-206 Smith-Waterman score: 4402; 90.379% identity (93.767% similar) in 738 aa overlap (53-782:16-727) 30 40 50 60 70 80 KIAA04 RGHPPSDPHSEEADPSSNSDIATEQPYNFWVDKSFTSRRSVWRSDGQNQHFPQALDLSRV :::::. :.::::::::.. :::.:.. : gi|149 MSGRKRSFTFGAYGGVDKSFSPRQSVWRSDGQKHSFPQTLNVLLV 10 20 30 40 90 100 110 120 130 140 KIAA04 NLVPSYTPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG . :::. : :::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DSVPSHPASPYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREG 50 60 70 80 90 100 150 160 170 180 190 200 KIAA04 PFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|149 PFPLILLPQFGGYWIEGTNHEISSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFN 110 120 130 140 150 160 210 220 230 240 250 260 KIAA04 YYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVC :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVC 170 180 190 200 210 220 270 280 290 300 310 320 KIAA04 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFV 230 240 250 260 270 280 330 340 350 360 370 380 KIAA04 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQ 290 300 310 320 330 340 390 400 410 420 430 440 KIAA04 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDD 350 360 370 380 390 400 450 460 470 480 490 500 KIAA04 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL 410 420 430 440 450 460 510 520 530 540 550 560 KIAA04 HIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|149 HIHSQSMMGLGGDDDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSG 470 480 490 500 510 520 570 580 590 600 610 620 KIAA04 SFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGS ::.:::::::::::::: ::::::::::::::::: gi|149 SFTPNNPDLAKAAGISL--------------------------IVPGKSPTRKKSGPFGS 530 540 550 630 640 650 660 670 680 KIAA04 RRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:.: gi|149 RRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRVESA 560 570 580 590 600 610 690 700 710 720 730 740 KIAA04 AQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLED :::.:.:. :::::::::::.:::::::::::.:::.:::::::::::::::.:::::.: gi|149 AQRTEVLQGFSRSSSSASSFTSVVEETEGVDGDDTGMESVSSSGTPHKRDSFLYSTWLDD 620 630 640 650 660 670 750 760 770 780 KIAA04 SVSTTSGGSSP--------DAGKLGDPACPEIKIQLEASEQHMPQLGC ::::::::::: :: : :::::::::::::.:::: ::.:: gi|149 SVSTTSGGSSPGLTRSPHPDAVKSGDPACPEIKIQLETSEQHTPQMGC 680 690 700 710 720 >>gi|119615389|gb|EAW94983.1| RAP1, GTPase activating pr (617 aa) initn: 3377 init1: 3377 opt: 3380 Z-score: 3706.0 bits: 696.2 E(): 1e-197 Smith-Waterman score: 3380; 93.128% identity (94.937% similar) in 553 aa overlap (102-653:1-545) 80 90 100 110 120 130 KIAA04 HFPQALDLSRVNLVPSYTPSLYPKNTDLFEMIEKMQGSRMDEQRCSFPPPLKTEEDYIPY :::::::::::::::::::::::::::::: gi|119 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPY 10 20 30 140 150 160 170 180 190 KIAA04 PSVHEVLGREGPFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSVHEVLGREGPFPLILLPQFGGYWIEGTNHEITSIPETEPLQSPTTKVKLECNPTARIY 40 50 60 70 80 90 200 210 220 230 240 250 KIAA04 RKHFLGKEHFNYYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RKHFLGKEHFNYYSLDAALGHLVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEF 100 110 120 130 140 150 260 270 280 290 300 310 KIAA04 PNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEEL 160 170 180 190 200 210 320 330 340 350 360 370 KIAA04 FSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVST 220 230 240 250 260 270 380 390 400 410 420 430 KIAA04 KLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGP 280 290 300 310 320 330 440 450 460 470 480 490 KIAA04 LYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTR 340 350 360 370 380 390 500 510 520 530 540 550 KIAA04 AALLETLYEELHIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AALLETLYEELHIHSQSMMGLGGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNK 400 410 420 430 440 450 560 570 580 590 600 610 KIAA04 KPNTVSTSHSGSFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIVPGKS :::::::::::::::::::::::::::::::::::::::::::::::::::: ..: : . gi|119 KPNTVSTSHSGSFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEE-VVVRGAA 460 470 480 490 500 620 630 640 650 660 670 KIAA04 PTRKKSGPFGSRRSSAIGIENIQEVQEKRESP-PAGQKTPDSGHVSQEPKSENSSTQSSP . . : ::. : .: .: .: : :: .: gi|119 GSGGCLHALFSARSQDGG--HIGDV-----APLPPGQAPGRAGWSGGSSDGTQHLLWGLV 510 520 530 540 550 560 680 690 700 710 720 730 KIAA04 EMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHK gi|119 PVPEPVPLTRGFWPCLGPWDPGPVPARIRYPKALHPAARPPISPVCMERHPSPLP 570 580 590 600 610 782 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 23:43:15 2009 done: Wed Mar 4 23:46:47 2009 Total Scan time: 1582.820 Total Display time: 0.420 Function used was FASTA [version 34.26.5 April 26, 2007]