hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03384410/chunk_1/iprscan-20080502-03384410.nocrc
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Query sequence: KIAA0460
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF04818.4.fs Protein of unknown function, DUF618             71.2    2.9e-23   1
PF04818.4.ls Protein of unknown function, DUF618             73.1    8.2e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF04818.4.fs   1/1      62   125 ..     1    71 []    71.2  2.9e-23
PF04818.4.ls   1/1      62   125 ..     1    71 []    73.1  8.2e-19

Alignments of top-scoring domains:
PF04818.4.fs: domain 1 of 1, from 62 to 125: score 71.2, E = 2.9e-23
                   *->snnRkKLvNlLYLANDVvQnSKvrKgpETFvdeFspvlveAfahiie
                       +  ++L  l+YLANDV+Qn K rK +  F ++F+ vl+eA a +  
    KIAA0460    62    YP--HRLN-LFYLANDVIQNCK-RKNAIIFRESFADVLPEAAALVK- 103  

                   egddkvKkklkRvinIWkeRnvFs<-*
                     d +v k+++R+++IW++Rnv+    
    KIAA0460   104 --DPSVSKSVERIFKIWEDRNVYP    125  

PF04818.4.ls: domain 1 of 1, from 62 to 125: score 73.1, E = 8.2e-19
                   *->snnRkKLvNlLYLANDVvQnSKvrKgpETFvdeFspvlveAfahiie
                       +  ++L  l+YLANDV+Qn K rK +  F ++F+ vl+eA a +  
    KIAA0460    62    YP--HRLN-LFYLANDVIQNCK-RKNAIIFRESFADVLPEAAALVK- 103  

                   egddkvKkklkRvinIWkeRnvFs<-*
                     d +v k+++R+++IW++Rnv+    
    KIAA0460   104 --DPSVSKSVERIFKIWEDRNVYP    125  

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