hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03254185/chunk_1/iprscan-20080502-03254185.nocrc
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Query sequence: KIAA0453
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF06650.2.ls Protein of unknown function (DUF1162)          203.5    4.6e-58   1
PF06650.2.fs Protein of unknown function (DUF1162)          201.6    1.7e-57   1
PF00627.21.fs UBA/TS-N domain                                 45.1    3.2e-12   1
PF00627.21.ls UBA/TS-N domain                                 47.1    5.6e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00627.21.fs   1/1    1459  1498 ..     1    41 []    45.1  3.2e-12
PF00627.21.ls   1/1    1459  1498 ..     1    41 []    47.1  5.6e-11
PF06650.2.fs   1/1    2084  2394 ..     1   348 []   201.6  1.7e-57
PF06650.2.ls   1/1    2084  2394 ..     1   348 []   203.5  4.6e-58

Alignments of top-scoring domains:
PF00627.21.fs: domain 1 of 1, from 1459 to 1498: score 45.1, E = 3.2e-12
                   *->ideeavkqLreMTGfdreeakkALeatngnverAvewLleh<-*
                      + e ++++L+e+ Gf++++++kAL a+ g + +A+ wL+++   
    KIAA0453  1459    VLELQLARLQEL-GFSMDDCRKALLACQGQLKKAASWLFKN    1498 

PF00627.21.ls: domain 1 of 1, from 1459 to 1498: score 47.1, E = 5.6e-11
                   *->ideeavkqLreMTGfdreeakkALeatngnverAvewLleh<-*
                      + e ++++L+e+ Gf++++++kAL a+ g + +A+ wL+++   
    KIAA0453  1459    VLELQLARLQEL-GFSMDDCRKALLACQGQLKKAASWLFKN    1498 

PF06650.2.fs: domain 1 of 1, from 2084 to 2394: score 201.6, E = 1.7e-57
                   *->kvdlLdLsvhvrkipGtaqalvvsifsPYwiiNkTgrmLiyksedtk
                      + +  ++ +  +   G+   l++ i++PYw+iNkTg++Li++++++k
    KIAA0453  2084    NLT-IRIVCRAE---GS---LKIFISAPYWLINKTGLPLIFRQDNAK 2123 

                   veaagqieeheeaedrhvkPPEFGlmFSFkdenSWffkknkvrlGkarid
                     aagq+eehe a+     P    l+F ++d++   ++ +  r+G+    
    KIAA0453  2124 TDAAGQFEEHELARS--LSP----LLFCYADKE--QPNLCTMRIGRGIHP 2165 

                   nse..WSekfSlDtvGsvgevec..rakhenknqeYnlGvsikessGkfs
                   +++++W+  fSlD  ++v ++++ ++++   +   Yn+G+++k ++G++ 
    KIAA0453  2166 EGMpgWCQGFSLDGGSGVRALKViqQGN--RPGLIYNIGIDVKKGRGRYI 2213 

                   lTkiVTftPRyivkNkskvtleFmqvrEegFqddsdk.dkilhipseeci
                   +T  V f+PRy++ Nks+ +l F q rE++   +   ++  ++  +  ++
    KIAA0453  2214 DTCMVIFAPRYLLDNKSSHKLAFAQ-REFARGQGTANpEGYISTLPGSSV 2262 

                   pltWprniqkrkLllvrv..seckhwsspfFyikevgstllklrksDDdd
                    ++Wprn+   +Ll+vr+ ++ ++ ws +f     ++s+++++r+     
    KIAA0453  2263 VFHWPRNDY-DQLLCVRLmdVPNCIWSGGF-EVNKNNSFHINMRD----- 2305 

                   edeeeggirveVnlteatffItftdyhtgpwPfrIkNhttvdilTYyQkg
                     ++ +++rve++l  at  I+f+d +  p+PfrI+N+++v+++ + Q g
    KIAA0453  2306 TLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNFSKVPVV-FTQHG 2354 

                   skpasegkkddavderflrsfksietvlpPgseadYaWDdPtgpsKkLvl
                      a +                 ++t ++P  ++dYaWD Pt+p   ++l
    KIAA0453  2355 V--AEPR----------------LRTEVKPMTSLDYAWDEPTLPP-FITL 2385 

                   ev.gknite<-*
                   +v+g+   e   
    KIAA0453  2386 TVkGAGSSE    2394 

PF06650.2.ls: domain 1 of 1, from 2084 to 2394: score 203.5, E = 4.6e-58
                   *->kvdlLdLsvhvrkipGtaqalvvsifsPYwiiNkTgrmLiyksedtk
                      + +  ++ +  +   G+   l++ i++PYw+iNkTg++Li++++++k
    KIAA0453  2084    NLT-IRIVCRAE---GS---LKIFISAPYWLINKTGLPLIFRQDNAK 2123 

                   veaagqieeheeaedrhvkPPEFGlmFSFkdenSWffkknkvrlGkarid
                     aagq+eehe a+     P    l+F ++d++   ++ +  r+G+    
    KIAA0453  2124 TDAAGQFEEHELARS--LSP----LLFCYADKE--QPNLCTMRIGRGIHP 2165 

                   nse..WSekfSlDtvGsvgevec..rakhenknqeYnlGvsikessGkfs
                   +++++W+  fSlD  ++v ++++ ++++   +   Yn+G+++k ++G++ 
    KIAA0453  2166 EGMpgWCQGFSLDGGSGVRALKViqQGN--RPGLIYNIGIDVKKGRGRYI 2213 

                   lTkiVTftPRyivkNkskvtleFmqvrEegFqddsdk.dkilhipseeci
                   +T  V f+PRy++ Nks+ +l F q rE++   +   ++  ++  +  ++
    KIAA0453  2214 DTCMVIFAPRYLLDNKSSHKLAFAQ-REFARGQGTANpEGYISTLPGSSV 2262 

                   pltWprniqkrkLllvrv..seckhwsspfFyikevgstllklrksDDdd
                    ++Wprn+   +Ll+vr+ ++ ++ ws +f     ++s+++++r+     
    KIAA0453  2263 VFHWPRNDY-DQLLCVRLmdVPNCIWSGGF-EVNKNNSFHINMRD----- 2305 

                   edeeeggirveVnlteatffItftdyhtgpwPfrIkNhttvdilTYyQkg
                     ++ +++rve++l  at  I+f+d +  p+PfrI+N+++v+++ + Q g
    KIAA0453  2306 TLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNFSKVPVV-FTQHG 2354 

                   skpasegkkddavderflrsfksietvlpPgseadYaWDdPtgpsKkLvl
                      a +                 ++t ++P  ++dYaWD Pt+p   ++l
    KIAA0453  2355 V--AEPR----------------LRTEVKPMTSLDYAWDEPTLPP-FITL 2385 

                   ev.gknite<-*
                   +v+g+   e   
    KIAA0453  2386 TVkGAGSSE    2394 

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