hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03154165/chunk_1/iprscan-20080502-03154165.nocrc
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Query sequence: KIAA0447
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03151.7.ls Triose-phosphate Transporter family            170.3    4.6e-48   1
PF03151.7.fs Triose-phosphate Transporter family            168.4    1.7e-47   1
PF08449.2.fs UAA transporter family                          17.7    4.6e-05   1
PF08449.2.ls UAA transporter family                        -113.4    8.8e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF08449.2.ls   1/1     137   436 ..     1   348 []  -113.4  8.8e-05
PF03151.7.fs   1/1     285   430 ..     1   164 []   168.4  1.7e-47
PF03151.7.ls   1/1     285   430 ..     1   164 []   170.3  4.6e-48
PF08449.2.fs   1/1     376   436 ..   288   348 .]    17.7  4.6e-05

Alignments of top-scoring domains:
PF08449.2.ls: domain 1 of 1, from 137 to 436: score -113.4, E = 8.8e-05
                   *->flicisGIFggycsngvlqElimtreygsdggsgerFsfgnlLTFaQ
                      +l  +  +F+++c+  +l  +i ++ +g+          +  L  +Q
    KIAA0447   137    LLYLTLWFFFSFCTL-FLNKYILSLLGGE----------PSMLGAVQ 172  

                   flfialvgllyllltkrlvnnvvppiklkkrkiPlktYvlivalfflssv
                    l+++++g + +l         +  ++l  + ++l t  +  ++ f++ v
    KIAA0447   173 MLSTTVIGCVKTLVPC---CLYQHKARLSYPPNFLMTMLFVGLMRFATVV 219  

                   lnNeALkydisyPthvifKScKlIPVMilGililgKrYsslqYlsvllit
                   l+  +Lk  + + +   +KS+ +I + i++  ilg    +l  ls + + 
    KIAA0447   220 LGLVSLKN-VAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVM 268  

                   lGviiFtLasakdsknsklttesdnvgktqflwWllGillLfgaLlmDal
                    G++++t        +++++                G+       +mD l
    KIAA0447   269 GGLALCT----ATEISFNVL----------------GFSAALSTNIMDCL 298  

                   tGntQEkly..kkYgkhstvtlvvakemmFysnllslpffllglldIrsh
                    + +  kl+++ kY  +         e+ Fy+   + +  l+   +    
    KIAA0447   299 QNVFSKKLLsgDKYRFSA-------PELQFYT-SAAAVAMLVPARV---- 336  

                   ftgllfsavsfllPllgl.............irhPs.vlfyLllnsltqy
                           +   +P++g ++++ + +++    ++ ++vlf+L   s+t y
    KIAA0447   337 --------FFTDVPVIGRsgksfsynqdvvlLLLTDgVLFHL--QSITAY 376  

                   vGqrfVfyliaefGaLTvtlVtTlRKfvSllLSvllFgnpltlqqwlGtl
                          +l  + ++ T+++  T+  ++S+ LSv++Fgn+ t++  +Gt+
    KIAA0447   377 -------ALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTA 419  

                   lVFlGiflyaylkkkka<-*
                   lV +G +ly  +++++    
    KIAA0447   420 LVTVGVLLYNKARQHQQ    436  

PF03151.7.fs: domain 1 of 1, from 285 to 430: score 168.4, E = 1.7e-47
                   *->GfilalaasalfaLrlilsqkllkkklkkgtklnplellyylspvaf
                      Gf +al  +++ +L++++s+kll ++   +++ +  el++y+s +a+
    KIAA0447   285    GFSAALSTNIMDCLQNVFSKKLLSGD---KYRFSAPELQFYTSAAAV 328  

                   ivllpg.llfvEgfklgksglkfkgsdlseEmeFkkGktqryvlllllsg
                   ++l+p++++f + +++g+sg++f +              q +vllll +g
    KIAA0447   329 AMLVPArVFFTDVPVIGRSGKSFSY-------------NQDVVLLLLTDG 365  

                   vlafllnlsaflllgrtSplTlsVagtvKrvvvivlsviiFgFmDdpvtp
                   vl++l+ ++a+ l+g++Sp+T+sVa+tvK+++ i+lsvi+Fg   +++t 
    KIAA0447   366 VLFHLQSITAYALMGKISPVTFSVASTVKHALSIWLSVIVFG---NKITS 412  

                   lnilGlaiAlaGvvlYsy<-*
                   l ++G+a+  +Gv+lY+    
    KIAA0447   413 LSAVGTALVTVGVLLYNK    430  

PF03151.7.ls: domain 1 of 1, from 285 to 430: score 170.3, E = 4.6e-48
                   *->GfilalaasalfaLrlilsqkllkkklkkgtklnplellyylspvaf
                      Gf +al  +++ +L++++s+kll ++   +++ +  el++y+s +a+
    KIAA0447   285    GFSAALSTNIMDCLQNVFSKKLLSGD---KYRFSAPELQFYTSAAAV 328  

                   ivllpg.llfvEgfklgksglkfkgsdlseEmeFkkGktqryvlllllsg
                   ++l+p++++f + +++g+sg++f +              q +vllll +g
    KIAA0447   329 AMLVPArVFFTDVPVIGRSGKSFSY-------------NQDVVLLLLTDG 365  

                   vlafllnlsaflllgrtSplTlsVagtvKrvvvivlsviiFgFmDdpvtp
                   vl++l+ ++a+ l+g++Sp+T+sVa+tvK+++ i+lsvi+Fg   +++t 
    KIAA0447   366 VLFHLQSITAYALMGKISPVTFSVASTVKHALSIWLSVIVFG---NKITS 412  

                   lnilGlaiAlaGvvlYsy<-*
                   l ++G+a+  +Gv+lY+    
    KIAA0447   413 LSAVGTALVTVGVLLYNK    430  

PF08449.2.fs: domain 1 of 1, from 376 to 436: score 17.7, E = 4.6e-05
                   *->fyliaefGaLTvtlVtTlRKfvSllLSvllFgnpltlqqwlGtllVF
                      ++l  + ++ T+++  T+  ++S+ LSv++Fgn+ t++  +Gt+lV 
    KIAA0447   376    YALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALVT 422  

                   lGiflyaylkkkka<-*
                   +G +ly  +++++    
    KIAA0447   423 VGVLLYNKARQHQQ    436  

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