hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02441259/chunk_1/iprscan-20080502-02441259.nocrc
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Query sequence: KIAA0428
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00642.15.fs Zinc finger C-x8-C-x5-C-x3-H type (and simil    51.8    1.6e-16   4
PF00642.15.ls Zinc finger C-x8-C-x5-C-x3-H type (and simil    52.4    1.4e-12   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00642.15.ls   1/4      17    43 ..     1    27 []    14.7    0.014
PF00642.15.ls   2/4      51    75 ..     1    27 []     2.7     0.54
PF00642.15.fs   3/4     183   209 ..     1    27 []    21.6  2.1e-06
PF00642.15.ls   3/4     183   209 ..     1    27 []    23.6  0.00066
PF00642.15.ls   4/4     219   243 ..     1    27 []    11.4    0.038

Alignments of top-scoring domains:
PF00642.15.ls: domain 1 of 4, from 17 to 43: score 14.7, E = 0.014
                   *->yktelCrffsrtGtCkyGdr.CkFaHge<-*
                         e Cr f+r GtC++ d++CkFaH+    
    KIAA0428    17    LTLEVCREFQR-GTCSRPDTeCKFAHPS    43   

PF00642.15.ls: domain 2 of 4, from 51 to 75: score 2.7, E = 0.54
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                       +   C + ++ G+C++ ++Ck+ H++   
    KIAA0428    51    GRVIACFDSLK-GRCSR-ENCKYLHPP    75   

PF00642.15.fs: domain 3 of 4, from 183 to 209: score 21.6, E = 2.1e-06
                   *->yktelCrffsrtGtCkyGdr.CkFaHge<-*
                       + e Cr ++r G C++G+++C+FaH+    
    KIAA0428   183    DRLEVCREYQR-GNCNRGENdCRFAHPA    209  

PF00642.15.ls: domain 3 of 4, from 183 to 209: score 23.6, E = 0.00066
                   *->yktelCrffsrtGtCkyGdr.CkFaHge<-*
                       + e Cr ++r G C++G+++C+FaH+    
    KIAA0428   183    DRLEVCREYQR-GNCNRGENdCRFAHPA    209  

PF00642.15.ls: domain 4 of 4, from 219 to 243: score 11.4, E = 0.038
                   *->yktelCrffsrtGtCkyGdrCkFaHge<-*
                           C+++ + G+C++ ++Ck+ H++   
    KIAA0428   219    NTVTVCMDYIK-GRCSR-EKCKYFHPP    243  

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