hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02423581/chunk_1/iprscan-20080502-02423581.nocrc
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Query sequence: KIAA0427
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02854.9.ls MIF4G domain                                   153.3    5.9e-43   1
PF02854.9.fs MIF4G domain                                   151.4    2.2e-42   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02854.9.fs   1/1     379   580 ..     1   230 []   151.4  2.2e-42
PF02854.9.ls   1/1     379   580 ..     1   230 []   153.3  5.9e-43

Alignments of top-scoring domains:
PF02854.9.fs: domain 1 of 1, from 379 to 580: score 151.4, E = 2.2e-42
                   *->lkkvngllnkLsespenfe.iikellklnmsdlreeDennkellksl
                      ++ +n+++n+ s+ ++++++ ++e  +  +s+         e+l+++
    KIAA0427   379    IEILNSMRNNSSDVDTKLTtFMEEAQNSTNSE---------EMLGEI 416  

                   lelifekaveepnfipayArLcalLnsknpgekteFgslllnrlqeeFek
                   +++i++kav+ ++f+ + A+Lc ++++++  e+t F+sllln+lq++F++
    KIAA0427   417 VRTIYQKAVSDRSFAFTAAKLCDKMALFMV-EGTKFRSLLLNMLQKDFTV 465  

                   releaeleeeersdrkrrlglvrFlgELynfqvltekiileilkelledl
                         +ee++++d +r+lg+++Fl+E +  +  ++   + +l + +  +
    KIAA0427   466 ------REELQQQDVERWLGFITFLCEVFGTMRSSTGEPFRVLVCPIYTC 509  

                   teedlqdqvrdeeslecllllLetiGklLdnsekskklmdeilerlqkil
                   ++e+lq q++ e+ + c+ + L+++G+lL+  e+++++m+e+l+  ++++
    KIAA0427   510 LRELLQSQDVKEDAVLCCSMELQSTGRLLE--EQLPEMMTELLASARDKM 557  

                   lkrdkshvrvesepelssrirfmledlielrknk<-*
                   l+           p+ s+ +r++l+ +iel++n    
    KIAA0427   558 LC-----------PSESMLTRSLLLEVIELHANS    580  

PF02854.9.ls: domain 1 of 1, from 379 to 580: score 153.3, E = 5.9e-43
                   *->lkkvngllnkLsespenfe.iikellklnmsdlreeDennkellksl
                      ++ +n+++n+ s+ ++++++ ++e  +  +s+         e+l+++
    KIAA0427   379    IEILNSMRNNSSDVDTKLTtFMEEAQNSTNSE---------EMLGEI 416  

                   lelifekaveepnfipayArLcalLnsknpgekteFgslllnrlqeeFek
                   +++i++kav+ ++f+ + A+Lc ++++++  e+t F+sllln+lq++F++
    KIAA0427   417 VRTIYQKAVSDRSFAFTAAKLCDKMALFMV-EGTKFRSLLLNMLQKDFTV 465  

                   releaeleeeersdrkrrlglvrFlgELynfqvltekiileilkelledl
                         +ee++++d +r+lg+++Fl+E +  +  ++   + +l + +  +
    KIAA0427   466 ------REELQQQDVERWLGFITFLCEVFGTMRSSTGEPFRVLVCPIYTC 509  

                   teedlqdqvrdeeslecllllLetiGklLdnsekskklmdeilerlqkil
                   ++e+lq q++ e+ + c+ + L+++G+lL+  e+++++m+e+l+  ++++
    KIAA0427   510 LRELLQSQDVKEDAVLCCSMELQSTGRLLE--EQLPEMMTELLASARDKM 557  

                   lkrdkshvrvesepelssrirfmledlielrknk<-*
                   l+           p+ s+ +r++l+ +iel++n    
    KIAA0427   558 LC-----------PSESMLTRSLLLEVIELHANS    580  

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