hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02304894/chunk_1/iprscan-20080502-02304894.nocrc
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Query sequence: KIAA0420
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00516                                                 214.2    1.2e-59   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00516    1/1     366   539 ..     1   184 []   214.2  1.2e-59

Alignments of top-scoring domains:
SM00516: domain 1 of 1, from 366 to 539: score 214.2, E = 1.2e-59
                   *->elevgkayipggrigtregyDkdGrpVlieragrfdpkgllksvtle
                      ++++++ +++gg++     +D dGrp++i+r+g++d+kgl+k v  e
    KIAA0420   366    PPALLEEFYAGGWH----YQDIDGRPLYILRLGQMDTKGLMKAVGEE 408  

                   ellrylvyvlEkalqelpaklekktggiegftvifDlkglsmsnfwspdl
                    llr++++v E ++++++  +++++++i+++t+++Dl+gl+m+++w+p +
    KIAA0420   409 ALLRHVLSVNEEGQKRCEGSTRQLGRPISSWTCLLDLEGLNMRHLWRPGV 458  

                   sllrkilkilqdhYPErLgkvliiNpPwvmaffrvlwkiikpFldektre
                   + l+ ++++++d+YPE+Lg++li+++P+    f+vlw++i+pF+ e tr+
    KIAA0420   459 KALLRMIEVVEDNYPETLGRLLIVRAPR---VFPVLWTLISPFINENTRR 505  

                   KivfvgpnkVsdsdwkeeLlkyidpeqLPeelGGtlk<-*
                   K+ + ++   s+    + L +y+d+e +P++lGG+++   
    KIAA0420   506 KFLIYSG---SNYQGPGGLVDYLDREVIPDFLGGESV    539  

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