hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01300304/chunk_1/iprscan-20080502-01300304.nocrc
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Query sequence: KIAA0385
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00746                                                 355.1   4.5e-102  10

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00746    1/10    321   357 ..     1    41 []    39.8  3.7e-07
SM00746    2/10    363   403 ..     1    41 []    35.2  8.9e-06
SM00746    3/10    419   454 ..     1    41 []    26.6   0.0033
SM00746    4/10    461   502 ..     1    41 []    37.0  2.5e-06
SM00746    5/10    508   546 ..     1    41 []    36.2  4.5e-06
SM00746    6/10    556   592 ..     1    41 []    34.8  1.2e-05
SM00746    7/10    601   637 ..     1    41 []    38.9  6.7e-07
SM00746    8/10    643   678 ..     1    41 []    29.5  0.00046
SM00746    9/10    689   724 ..     1    41 []    41.9  8.7e-08
SM00746   10/10    730   765 ..     1    41 []    35.1  9.2e-06

Alignments of top-scoring domains:
SM00746: domain 1 of 10, from 321 to 357: score 39.8, E = 3.7e-07
                   *->CdfCgkeienpgtgimvvrydGkvyKyFCSskClskfkkkr<-*
                      C++C +++++++t   +++++G  + +FCSs+Cl++f kk+   
    KIAA0385   321    CAHCRTPLQKGQT---AYQRKGLPQ-LFCSSSCLTTFSKKP    357  

SM00746: domain 2 of 10, from 363 to 403: score 35.2, E = 8.9e-06
                   *->CdfCgkeienpgtgimvvrydGkvyKyFCSskClskfkkkr<-*
                      C+fC+kei+n +++ ++ +  G  ++ FC s Cls +++++   
    KIAA0385   363    CTFCKKEIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQ    403  

SM00746: domain 3 of 10, from 419 to 454: score 26.6, E = 0.0033
                   *->CdfCgkeienpgtgimvvrydGkvyKyFCSskClskfkkkr<-*
                      C+ C k+ e       v  +++ v+ + CS +C+skf++++   
    KIAA0385   419    CSICQKTGEVLHE---VS-NGSVVH-RLCSDSCFSKFRANK    454  

SM00746: domain 4 of 10, from 461 to 502: score 37.0, E = 2.5e-06
                   *->CdfCgkeienpgt..gimvvrydGkvyKyFCSskClskfkkkr<-*
                      Cd Cg +i+++++++g+ + +++G+++ +FC+++Cl ++kkk+   
    KIAA0385   461    CDQCGAYIYTKTGspGPELLFHEGQQK-RFCNTTCLGAYKKKN    502  

SM00746: domain 5 of 10, from 508 to 546: score 36.2, E = 4.5e-06
                   *->CdfCgkeienpgtgimvvrydGkvyKyFCSskClskfkkkr<-*
                      C +C++ ++n ++ ++v+ ++Gk+  +FCS  C +++k+k+   
    KIAA0385   508    CVWCKTLCKNFEMLSHVD-RNGKTS-LFCSLCCTTSYKVKQ    546  

SM00746: domain 6 of 10, from 556 to 592: score 34.8, E = 1.2e-05
                   *->CdfCgkeienpgtgimvvrydGkvyKyFCSskClskfkkkr<-*
                      C+fC + ++ p +   +++ d +vy +FCS +C++kf++     
    KIAA0385   556    CSFCRRSLSDPCY---YNKVDRTVY-QFCSPSCWTKFQRTS    592  

SM00746: domain 7 of 10, from 601 to 637: score 38.9, E = 6.7e-07
                   *->CdfCgkeienpgtgimvvrydGkvyKyFCSskClskfkkkr<-*
                      C++C+  +  +g +++++ ++++v+ +FC+++C+  fk+ r   
    KIAA0385   601    CHYCHSLF--SGKPEVLD-WQDQVF-QFCCRDCCEDFKRLR    637  

SM00746: domain 8 of 10, from 643 to 678: score 29.5, E = 0.00046
                   *->CdfCgkeienpgtgimvvrydGkvyKyFCSskClskfkkkr<-*
                      C++C +e   ++    ++ + G ++  FCS++C   +k+++   
    KIAA0385   643    CEHCRQEKLLHEK---LR-FSGVEK-SFCSEGCVLLYKQDF    678  

SM00746: domain 9 of 10, from 689 to 724: score 41.9, E = 8.7e-08
                   *->CdfCgkeienpgtgimvvrydGkvyKyFCSskClskfkkkr<-*
                      C++C+++++++ t    +++dG ++ +FCS++C+sk++ ++   
    KIAA0385   689    CTYCSQTCQRGVT----EQLDGSTW-DFCSEDCKSKYLLWY    724  

SM00746: domain 10 of 10, from 730 to 765: score 35.1, E = 9.2e-06
                   *->CdfCgkeienpgtgimvvrydGkvyKyFCSskClskfkkkr<-*
                      C+ C+++ +  +t   ++ + G++  +FC++ Cl +f +++   
    KIAA0385   730    CHACKRQGKLLET---IH-WRGQIR-HFCNQQCLLRFYSQQ    765  

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