hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-01232299/chunk_1/iprscan-20080502-01232299.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0381 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF02181.13.ls Formin Homology 2 Domain 536.3 3.1e-158 1 PF02181.13.fs Formin Homology 2 Domain 534.3 1.2e-157 1 PF06367.7.fs Diaphanous FH3 Domain 245.6 7.3e-74 1 PF06367.7.ls Diaphanous FH3 Domain 247.6 2.5e-71 1 PF06371.4.fs Diaphanous GTPase-binding Domain 202.0 7.7e-66 1 PF06371.4.ls Diaphanous GTPase-binding Domain 203.6 4.4e-58 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF06371.4.ls 1/1 86 275 .. 1 323 [] 203.6 4.4e-58 PF06371.4.fs 1/1 86 275 .. 1 323 [] 202.0 7.7e-66 PF06367.7.fs 1/1 277 483 .. 1 234 [] 245.6 7.3e-74 PF06367.7.ls 1/1 277 483 .. 1 234 [] 247.6 2.5e-71 PF02181.13.fs 1/1 642 1015 .. 1 413 [] 534.3 1.2e-157 PF02181.13.ls 1/1 642 1015 .. 1 413 [] 536.3 3.1e-158 Alignments of top-scoring domains: PF06371.4.ls: domain 1 of 1, from 86 to 275: score 203.6, E = 4.4e-58 *->lqmpsdeeLVdelFeelLkedrifmnlpedKrWeaLralsnekKWel + p eeL +++F+el+ ++ ++l+++ r ea++al+ ekKW++ KIAA0381 86 SPIPNAEEL-NIRFAELV-DE---LDLTDKNR-EAMFALPPEKKWQI 126 icqylsknkkgkkkksskselnekaiaSdileilteesspqeYiekLrsg +c++++ ++ k+++ s+p+ Yi+ +s+ KIAA0381 127 YCSKKKEQEDPNKLAT---------------------SWPDYYIDRINSM 155 assekllscekeeeehslknkslgslSpstkvvddgLkvaelesLrVsLr a+ ++l + +ee e + + +e+L+++Lr KIAA0381 156 AAMQSLYAFDEEETEMRNQV---------------------VEDLKTALR 184 tnpvsWVkaFiklgNkGlirllkiLqtflkkkiyelestdsvesgveksk t+p+++V++Fi+l+ Gl++ll++L ++ + ++ KIAA0381 185 TQPMRFVTRFIELE--GLTCLLNFLRSMDHATCES--------------- 217 kdspssedlskasprpsPqqnssqesksqqtlkllsqlsaqaqqlqkqql KIAA0381 - -------------------------------------------------- - qqsttliektlpsidkkiqfecirClKalMNnklGlkrvLsheesivikl +i++++i+C+KalMNn++G+++vL+ e+ i++ KIAA0381 218 ----------------RIHTSLIGCIKALMNNSQGRAHVLAQPEA--IST 249 lvlsLdssklktrklvleLLaalCiv<-* +++sL +++ kt+++vle+L+a+C+v KIAA0381 250 IAQSLRTENSKTKVAVLEILGAVCLV 275 PF06371.4.fs: domain 1 of 1, from 86 to 275: score 202.0, E = 7.7e-66 *->lqmpsdeeLVdelFeelLkedrifmnlpedKrWeaLralsnekKWel + p eeL +++F+el+ ++ ++l+++ r ea++al+ ekKW++ KIAA0381 86 SPIPNAEEL-NIRFAELV-DE---LDLTDKNR-EAMFALPPEKKWQI 126 icqylsknkkgkkkksskselnekaiaSdileilteesspqeYiekLrsg +c++++ ++ k+++ s+p+ Yi+ +s+ KIAA0381 127 YCSKKKEQEDPNKLAT---------------------SWPDYYIDRINSM 155 assekllscekeeeehslknkslgslSpstkvvddgLkvaelesLrVsLr a+ ++l + +ee e + + +e+L+++Lr KIAA0381 156 AAMQSLYAFDEEETEMRNQV---------------------VEDLKTALR 184 tnpvsWVkaFiklgNkGlirllkiLqtflkkkiyelestdsvesgveksk t+p+++V++Fi+l+ Gl++ll++L ++ + ++ KIAA0381 185 TQPMRFVTRFIELE--GLTCLLNFLRSMDHATCES--------------- 217 kdspssedlskasprpsPqqnssqesksqqtlkllsqlsaqaqqlqkqql KIAA0381 - -------------------------------------------------- - qqsttliektlpsidkkiqfecirClKalMNnklGlkrvLsheesivikl +i++++i+C+KalMNn++G+++vL+ e+ i++ KIAA0381 218 ----------------RIHTSLIGCIKALMNNSQGRAHVLAQPEA--IST 249 lvlsLdssklktrklvleLLaalCiv<-* +++sL +++ kt+++vle+L+a+C+v KIAA0381 250 IAQSLRTENSKTKVAVLEILGAVCLV 275 PF06367.7.fs: domain 1 of 1, from 277 to 483: score 245.6, E = 7.3e-74 *->gGhelvleaiinfkevcdereRFrtlvsaldsfssgeedasleykva gGh++vl+a+++ ++ er+RF+tl ++ld+ s g++++ +++k+a KIAA0381 277 GGHKKVLQAMLHYQVYAAERTRFQTLLNELDR-SLGRYRDEVNLKTA 322 tmqFINalvvagnspedlqfRlhLRsEftelGLdeyleklkntssesdkL +m+FINa+ +ag+++++l+fRlhLR+Ef++lG++ +++kl+ + e+ L KIAA0381 323 IMSFINAVLNAGAGEDNLEFRLHLRYEFLMLGIQPVIDKLRQH--ENAIL 370 ddqIklFeenmidvrellddantktkvledleeleerleelkesfaetsv d+++++Fe+ r+ ed el++r++ ++ + KIAA0381 371 DKHLDFFEMV----RN------------EDDLELARRFDMVH-------I 397 eldslssvaellsnllkltgaedlllSilQhllllredseeskLvsyikl + +s+s+++el++ +lk t+a+++llS+l+h+l ++++ ++ ++++l KIAA0381 398 DTKSASQMFELIHKKLKYTEAYPCLLSVLHHCLQMPYKRNGGY-FQQWQL 446 leeivqqIllhrtkppdpkfeqslqenldegterlld<-* l++i+qqI+l+++++ dp++ +++n+++ + +l+ KIAA0381 447 LDRILQQIVLQDERGVDPDLAPLENFNVKNIVNMLIN 483 PF06367.7.ls: domain 1 of 1, from 277 to 483: score 247.6, E = 2.5e-71 *->gGhelvleaiinfkevcdereRFrtlvsaldsfssgeedasleykva gGh++vl+a+++ ++ er+RF+tl ++ld+ s g++++ +++k+a KIAA0381 277 GGHKKVLQAMLHYQVYAAERTRFQTLLNELDR-SLGRYRDEVNLKTA 322 tmqFINalvvagnspedlqfRlhLRsEftelGLdeyleklkntssesdkL +m+FINa+ +ag+++++l+fRlhLR+Ef++lG++ +++kl+ + e+ L KIAA0381 323 IMSFINAVLNAGAGEDNLEFRLHLRYEFLMLGIQPVIDKLRQH--ENAIL 370 ddqIklFeenmidvrellddantktkvledleeleerleelkesfaetsv d+++++Fe+ r+ ed el++r++ ++ + KIAA0381 371 DKHLDFFEMV----RN------------EDDLELARRFDMVH-------I 397 eldslssvaellsnllkltgaedlllSilQhllllredseeskLvsyikl + +s+s+++el++ +lk t+a+++llS+l+h+l ++++ ++ ++++l KIAA0381 398 DTKSASQMFELIHKKLKYTEAYPCLLSVLHHCLQMPYKRNGGY-FQQWQL 446 leeivqqIllhrtkppdpkfeqslqenldegterlld<-* l++i+qqI+l+++++ dp++ +++n+++ + +l+ KIAA0381 447 LDRILQQIVLQDERGVDPDLAPLENFNVKNIVNMLIN 483 PF02181.13.fs: domain 1 of 1, from 642 to 1015: score 534.3, E = 1.2e-157 *->kkepkpkkkLKpLhWdKlnpsqdrgtsvWdkldeesfekkldldlse k++p+p +LK+++W+Kln++ ++gt vW+++d+ + + ldl++ KIAA0381 642 KRVPQPSHPLKSFNWVKLNEERVPGT-VWNEIDDMQVFR--ILDLED 685 lEelFsakakkkkekksseksskskkkkkeisvLDpkrsQNiaIlLrkls +E++Fsa++ ++ke +s+e+ +++k+ke+sv+D++r+QN+ IlL+kl KIAA0381 686 FEKMFSAYQRHQKELGSTEDIYLASRKVKELSVIDGRRAQNCIILLSKL- 734 klppeeivqailemDe.dvLgvvlflkemldllenLlkmaPtkeElkklq kl++eei+qail+mDe++ L +d+le+Llk++P+k ++++l KIAA0381 735 KLSNEEIRQAILKMDEqEDLA--------KDMLEQLLKFIPEKSDIDLL- 775 ekeykgdekspskLgraEqqFLlelskliprleeRlrallFkstFeeeve e+k++ +++++ra+ +FL+e+s+ i ++++Rl+al Fk+ F+e+ + KIAA0381 776 -EEHKHE---IERMARAD-RFLYEMSR-IDHYQQRLQALFFKKKFQERLA 819 elkpsletleaAseeLreSrkfkklLeliLalGNyMNsGtrrrGnAkGFk e kp++e++ As eL +S++++++Le+iLa+GN+MN+G+r G+A+GF+ KIAA0381 820 EAKPKVEAILLASRELVRSKRLRQMLEVILAIGNFMNKGQR--GGAYGFR 867 LssLlKLsdvKstidnktTLLHflvkeieesEGkrlEeyrKLklpelldf sL+K++d+Ks+id++++LLH+l ++e+ ++p++l+ KIAA0381 868 VASLNKIADTKSSIDRNISLLHYLIMILEK------------HFPDILNM 905 sseLshVekAakvdleeLeadvkeLekglkklekelelseeSkvsdeeps +seL+h+++Aakv+l eLe++v +L++gl+++e ele++ + eps KIAA0381 906 PSELQHLPEAAKVNLAELEKEVGNLRRGLRAVEVELEYQRR---QVREPS 952 dkFvevmkeFleeAeekldkLesllkeakelfkelteYFghggedpkdet dkFv+vm++F+ ++++ +Le++l+ea+++f +++ +F ge + ++ KIAA0381 953 DKFVPVMSDFITVSSFSFSELEDQLNEARDKFAKALMHF---GEHDS-KM 998 speeFFkilrdFlnefk<-* +p+eFF+i+++Fl++f+ KIAA0381 999 QPDEFFGIFDTFLQAFS 1015 PF02181.13.ls: domain 1 of 1, from 642 to 1015: score 536.3, E = 3.1e-158 *->kkepkpkkkLKpLhWdKlnpsqdrgtsvWdkldeesfekkldldlse k++p+p +LK+++W+Kln++ ++gt vW+++d+ + + ldl++ KIAA0381 642 KRVPQPSHPLKSFNWVKLNEERVPGT-VWNEIDDMQVFR--ILDLED 685 lEelFsakakkkkekksseksskskkkkkeisvLDpkrsQNiaIlLrkls +E++Fsa++ ++ke +s+e+ +++k+ke+sv+D++r+QN+ IlL+kl KIAA0381 686 FEKMFSAYQRHQKELGSTEDIYLASRKVKELSVIDGRRAQNCIILLSKL- 734 klppeeivqailemDe.dvLgvvlflkemldllenLlkmaPtkeElkklq kl++eei+qail+mDe++ L +d+le+Llk++P+k ++++l KIAA0381 735 KLSNEEIRQAILKMDEqEDLA--------KDMLEQLLKFIPEKSDIDLL- 775 ekeykgdekspskLgraEqqFLlelskliprleeRlrallFkstFeeeve e+k++ +++++ra+ +FL+e+s+ i ++++Rl+al Fk+ F+e+ + KIAA0381 776 -EEHKHE---IERMARAD-RFLYEMSR-IDHYQQRLQALFFKKKFQERLA 819 elkpsletleaAseeLreSrkfkklLeliLalGNyMNsGtrrrGnAkGFk e kp++e++ As eL +S++++++Le+iLa+GN+MN+G+r G+A+GF+ KIAA0381 820 EAKPKVEAILLASRELVRSKRLRQMLEVILAIGNFMNKGQR--GGAYGFR 867 LssLlKLsdvKstidnktTLLHflvkeieesEGkrlEeyrKLklpelldf sL+K++d+Ks+id++++LLH+l ++e+ ++p++l+ KIAA0381 868 VASLNKIADTKSSIDRNISLLHYLIMILEK------------HFPDILNM 905 sseLshVekAakvdleeLeadvkeLekglkklekelelseeSkvsdeeps +seL+h+++Aakv+l eLe++v +L++gl+++e ele++ + eps KIAA0381 906 PSELQHLPEAAKVNLAELEKEVGNLRRGLRAVEVELEYQRR---QVREPS 952 dkFvevmkeFleeAeekldkLesllkeakelfkelteYFghggedpkdet dkFv+vm++F+ ++++ +Le++l+ea+++f +++ +F ge + ++ KIAA0381 953 DKFVPVMSDFITVSSFSFSELEDQLNEARDKFAKALMHF---GEHDS-KM 998 speeFFkilrdFlnefk<-* +p+eFF+i+++Fl++f+ KIAA0381 999 QPDEFFGIFDTFLQAFS 1015 //