hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-01031997/chunk_1/iprscan-20080502-01031997.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0369 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 345.7 7.2e-101 1 PF00069.15.fs Protein kinase domain 343.8 2.7e-100 1 PF03607.8.ls Doublecortin 191.5 1.9e-54 2 PF03607.8.fs Doublecortin 187.6 2.3e-53 2 PF07714.7.fs Protein tyrosine kinase 77.6 1.9e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF03607.8.ls 1/2 139 203 .. 1 69 [] 94.2 3.6e-25 PF03607.8.fs 1/2 139 203 .. 1 69 [] 92.3 6.6e-26 PF03607.8.ls 2/2 268 329 .. 1 69 [] 97.3 4.4e-26 PF03607.8.fs 2/2 268 329 .. 1 69 [] 95.4 8.5e-27 PF00069.15.fs 1/1 455 712 .. 1 287 [] 343.8 2.7e-100 PF00069.15.ls 1/1 455 712 .. 1 287 [] 345.7 7.2e-101 PF07714.7.fs 1/1 455 637 .. 1 201 [. 77.6 1.9e-22 Alignments of top-scoring domains: PF03607.8.ls: domain 1 of 2, from 139 to 203: score 94.2, E = 3.6e-25 *->lvvnrkrdvksfdaLLedLtkvvTekiklptGaaAvrklYTtDGshr ++++++r ++sf+aLL dLt+ ++++++lp+G vr +YT+DG ++ KIAA0369 139 YAISPDR-FRSFEALLADLTRTLSDNVNLPQG---VRTIYTIDGLKK 181 islldeledggvYVAsgseaFk<-* is+ld+l +g+ YV+++ e+Fk KIAA0369 182 ISSLDQLVEGESYVCGSIEPFK 203 PF03607.8.fs: domain 1 of 2, from 139 to 203: score 92.3, E = 6.6e-26 *->lvvnrkrdvksfdaLLedLtkvvTekiklptGaaAvrklYTtDGshr ++++++r ++sf+aLL dLt+ ++++++lp+G vr +YT+DG ++ KIAA0369 139 YAISPDR-FRSFEALLADLTRTLSDNVNLPQG---VRTIYTIDGLKK 181 islldeledggvYVAsgseaFk<-* is+ld+l +g+ YV+++ e+Fk KIAA0369 182 ISSLDQLVEGESYVCGSIEPFK 203 PF03607.8.ls: domain 2 of 2, from 268 to 329: score 97.3, E = 4.4e-26 *->lvvnrkrdvksfdaLLedLtkvvTekiklptGaaAvrklYTtDGshr +++n+k+ ++sf+++L+d +T+ ikl+ G+ v++lYT+DG+++ KIAA0369 268 ILLNKKT-AHSFEQVLTD----ITDAIKLDSGV--VKRLYTLDGKQV 307 islldeledggvYVAsgseaFk<-* +l+d++ d+++++A+g+e+F+ KIAA0369 308 MCLQDFFGDDDIFIACGPEKFR 329 PF03607.8.fs: domain 2 of 2, from 268 to 329: score 95.4, E = 8.5e-27 *->lvvnrkrdvksfdaLLedLtkvvTekiklptGaaAvrklYTtDGshr +++n+k+ ++sf+++L+d +T+ ikl+ G+ v++lYT+DG+++ KIAA0369 268 ILLNKKT-AHSFEQVLTD----ITDAIKLDSGV--VKRLYTLDGKQV 307 islldeledggvYVAsgseaFk<-* +l+d++ d+++++A+g+e+F+ KIAA0369 308 MCLQDFFGDDDIFIACGPEKFR 329 PF00069.15.fs: domain 1 of 1, from 455 to 712: score 343.8, E = 2.7e-100 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr y++++++G G+f++V+++++++t +++A+Kiikk+k + k++++ KIAA0369 455 YKVGRTIGDGNFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQN- 500 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E++il+r++HpNIv li+ + +++lylV+E++ gG dLfd+++ KIAA0369 501 --EVSILRRVKHPNIVLLIEEMDVPTELYLVMELVKGG----DLFDAIT- 543 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv + +++ +e++a +++ ++++++YLHs +i+HRD+KPeN+L+ + + KIAA0369 544 --STNKY--TERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLVY-EHQ 588 vda.flKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkv ++++lK++DFGlA t +++l+t++GTp Y+APE++ +gyg kv KIAA0369 589 DGSkSLKLGDFGLA----TiVDGpLYTVCGTPTYVAPEIIA-ETGYGLKV 633 DvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewds D+W++Gvi y+ll+G pPF+g+ ++dq +l+++il+++++f+sp+wd+ KIAA0369 634 DIWAAGVITYILLCGFPPFRGS---GDDQEVLFDQILMGQVDFPSPYWDN 680 isrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* +s ++ak+Li+ +L +D +R +a ++l+HPw+ KIAA0369 681 VS-----------DSAKELITMMLLVDVDQRFSAVQVLEHPWV 712 PF00069.15.ls: domain 1 of 1, from 455 to 712: score 345.7, E = 7.2e-101 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr y++++++G G+f++V+++++++t +++A+Kiikk+k + k++++ KIAA0369 455 YKVGRTIGDGNFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQN- 500 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E++il+r++HpNIv li+ + +++lylV+E++ gG dLfd+++ KIAA0369 501 --EVSILRRVKHPNIVLLIEEMDVPTELYLVMELVKGG----DLFDAIT- 543 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv + +++ +e++a +++ ++++++YLHs +i+HRD+KPeN+L+ + + KIAA0369 544 --STNKY--TERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLVY-EHQ 588 vda.flKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkv ++++lK++DFGlA t +++l+t++GTp Y+APE++ +gyg kv KIAA0369 589 DGSkSLKLGDFGLA----TiVDGpLYTVCGTPTYVAPEIIA-ETGYGLKV 633 DvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewds D+W++Gvi y+ll+G pPF+g+ ++dq +l+++il+++++f+sp+wd+ KIAA0369 634 DIWAAGVITYILLCGFPPFRGS---GDDQEVLFDQILMGQVDFPSPYWDN 680 isrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* +s ++ak+Li+ +L +D +R +a ++l+HPw+ KIAA0369 681 VS-----------DSAKELITMMLLVDVDQRFSAVQVLEHPWV 712 PF07714.7.fs: domain 1 of 1, from 455 to 637: score 77.6, E = 1.9e-22 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei k g+++G G+F +V +++ + +t + A K+++k ++ +e KIAA0369 455 YKVGRTIGDGNFAVVKECVER----STAREYALKIIkKS-KCRGKE- 495 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd +E+si+++ +HpNiV L+ + e ly+V+E+++gGd KIAA0369 496 --HMIQNEVSILRRV-KHPNIVLLIEEMDVPTE-----LYLVMELVKGGD 537 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV L d + ++ t d ++ + A++ YL+s n+vHRD+ N LV KIAA0369 538 LFDAITS---TNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLV 584 se....nlvVKIsDFGLaRdiynddyYvrkkgggklPvkWmAPEslkygk e++++++ K +DFGLa + + Y ++ g APE +++ KIAA0369 585 YEhqdgSKSLKLGDFGLATIV-DGPLY-TVCG----TPTYVAPEIIAETG 628 FtskSDVWS<-* + k D+W+ KIAA0369 629 YGLKVDIWA 637 //