hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-00092176/chunk_1/iprscan-20080502-00092176.nocrc
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Query sequence: KIAA0337
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00325                                                 220.1    1.9e-61   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00325    1/1     616   799 ..     1   211 []   220.1  1.9e-61

Alignments of top-scoring domains:
SM00325: domain 1 of 1, from 616 to 799: score 220.1, E = 1.9e-61
                   *->vlkELlqTErnYVrdLkilvevflkpLkkeakssllpllspdevktl
                      v++ Ll+TE++YV++L++l++++++pLk++++s   +l +p+ v+++
    KIAA0337   616    VAMTLLDTEQSYVESLRTLMQGYMQPLKQPENS---VLCDPSLVDEI 659  

                   FgpNieeiyefHrrFLdeLeerveewllskdlKsernsviedsgerigdv
                   F   i+e++e+H++FL++   +++ w               + ++++g++
    KIAA0337   660 FD-QIPELLEHHEQFLEQVRHCMQTW---------------HAQQKVGAL 693  

                   FlklfsaeeffkiYseYcsnh...pdalellkkLmkkkknpaFqkflkei
                   ++++fs+  + +iYs+Y++n+ + +da+++ k+      +paF kfl++ 
    KIAA0337   694 LVQSFSKDVLVNIYSAYIDNFlnaKDAVRVAKE-----ARPAFLKFLEQS 738  

                   eskpncrsksearltLeslLikPvQRltkYpLLLkellkhtppdhedred
                   +++ n +     ++ L++l+ikPvQR+++Y LL+k+llkhtp+dh+d+  
    KIAA0337   739 MRE-NKE-----KQALSDLMIKPVQRIPRYELLVKDLLKHTPEDHPDHPL 782  

                   LkkAleaikelasqvNe<-*
                   L +A+++ik++a+++N+   
    KIAA0337   783 LLEAQRNIKQVAERINK    799  

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