hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23522477/chunk_1/iprscan-20080501-23522477.nocrc
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Query sequence: KIAA0327
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00112                                                 465.1   3.3e-135   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00112    1/6      97   209 ..     1   121 []    16.5    0.057
SM00112    2/6     233   318 ..     1   121 []    94.5  1.3e-23
SM00112    3/6     342   423 ..     1   121 []    96.2  3.9e-24
SM00112    4/6     447   528 ..     1   121 []    90.7  1.7e-22
SM00112    5/6     552   638 ..     1   121 []   101.0  1.4e-25
SM00112    6/6     669   747 ..     1   121 []    66.3  3.9e-15

Alignments of top-scoring domains:
SM00112: domain 1 of 6, from 97 to 209: score 16.5, E = 0.057
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils..................
                      +  t    g     g+      ++Ys+ +++++++  ++ +++ + +
    KIAA0327    97    LLGTLWEIG----RGQ------IRYSVPEetdkgsfvgniskdlgld 133  

                   ..................lFsIdpetGtngpsLvkleiiitttkpLDREe
                   +++  +++ +  ++++++lF+++p++G            ++t++++DREe
    KIAA0327   134 prklakhgvrivsrgrtqLFALNPRSG-----------SLITAGRIDREE 172  

                   qflkreqtdeseYtLtv..eAtDgGgpppgdssptrksqqtpplsstatv
                    + +      ++  +++++ + D+G                  +     v
    KIAA0327   173 LCAQS-----PRCLINIntLVEDKG------------------KL--FGV 197  

                   tvtVlDvNDNaP<-*
                    ++++D+NDN P   
    KIAA0327   198 EIEIIDINDNNP    209  

SM00112: domain 2 of 6, from 233 to 318: score 94.5, E = 1.3e-23
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils..lFsIdpetGtngpsLv
                        A+D+D g    N+        +Y+++++++Fs+d +tG ng+   
    KIAA0327   233    PEAVDPDVG---VNSL------QSYQLSPnhHFSLDVQTGDNGA--- 267  

                   kleiiitttkpLDREeqflkreqtdeseYtLtveAtDgGgpppgdssptr
                    +  ++++ ++LDREe          + ++L+ +A+DgG pp        
    KIAA0327   268 -INPELVLERALDREEE---------AAHHLVLTASDGGKPP-------- 299  

                   ksqqtpplsstatvtvtVlDvNDNaP<-*
                          +sst+ ++vtVlD NDNaP   
    KIAA0327   300 -------RSSTVRIHVTVLDTNDNAP    318  

SM00112: domain 3 of 6, from 342 to 423: score 96.2, E = 3.9e-24
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils.......lFsIdpetGtn
                      v+A+D+D+g    Ngk      v Y +   ++++++lF+++++tG  
    KIAA0327   342    VTASDPDEG---INGK------VAYKFRKinekqtpLFQLNENTG-- 377  

                   gpsLvkleiiitttkpLDREeqflkreqtdeseYtLtveAtDgGgpppgd
                            +i+++k+LD+Ee          s Y+++++A D G      
    KIAA0327   378 ---------EISIAKSLDYEEC---------SFYEMEIQAEDVGA----- 404  

                   ssptrksqqtpplsstatvtvtVlDvNDNaP<-*
                               l + + + + V+DvNDN+P   
    KIAA0327   405 ------------LLGRTKLLISVEDVNDNRP    423  

SM00112: domain 4 of 6, from 447 to 528: score 90.7, E = 1.7e-22
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils..lFsIdpetGtngpsLv
                      +s++D Dsg    Ng+      v++   ++ +F+++++ G+      
    KIAA0327   447    LSVHDQDSG---KNGQ------VVCYTRDnlPFKLEKSIGN------ 478  

                   kleiiitttkpLDREeqflkreqtdeseYtLtveAtDgGgpppgdssptr
                     ++ ++t+k LDRE+          s Y++tv A+D G+pp        
    KIAA0327   479 --YYRLVTRKYLDRENV---------SIYNITVMASDLGTPP-------- 509  

                   ksqqtpplsstatvtvtVlDvNDNaP<-*
                          ls+++++  +V D+NDN+P   
    KIAA0327   510 -------LSTETQIALHVADINDNPP    528  

SM00112: domain 5 of 6, from 552 to 638: score 101.0, E = 1.4e-25
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils..........lFsIdpet
                      ++A+D+Ds    eN++      vtYs+++++ ++ + +++ sI+++t
    KIAA0327   552    LTAHDPDSQ---ENAQ------VTYSVTEdtlqgaplssYISINSDT 589  

                   GtngpsLvkleiiitttkpLDREeqflkreqtdeseYtLtveAtDgGgpp
                   G           ++++++++D+E++            +L v+A+D+G pp
    KIAA0327   590 G-----------VLYALQSFDYEQI---------RDLQLLVTASDSGDPP 619  

                   pgdssptrksqqtpplsstatvtvtVlDvNDNaP<-*
                                  lss+ ++  +VlD+NDNaP   
    KIAA0327   620 ---------------LSSNMSLSLFVLDQNDNAP    638  

SM00112: domain 6 of 6, from 669 to 747: score 66.3, E = 3.9e-15
                   *->vsAtDaDsgsngeNgkpgdaevvtYsils.....lFsIdpetGtngp
                      v+A+D+Dsg   +N++      ++Y++l  ++++lFs+  +tG    
    KIAA0327   669    VVAVDRDSG---QNAW------LSYRLLKasepgLFSVGLHTG---- 702  

                   sLvkleiiittt.kpLDREeqflkreqtdeseYtLtveAtDgGgpppgds
                          +++t+++ LDR++          +  +L+v ++D+G+pp    
    KIAA0327   703 -------EVRTArALLDRDAL---------K-QSLVVAVQDHGQPP---- 731  

                   sptrksqqtpplsstatvtvtVlDvNDNaP<-*
                              ls+t+t+tv V D     P   
    KIAA0327   732 -----------LSATVTLTVAVAD---SIP    747  

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