hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23442909/chunk_1/iprscan-20080501-23442909.nocrc
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Query sequence: KIAA0324
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF08312.2.fs cwf21                                           89.6    7.8e-26   1
PF08312.2.ls cwf21                                           91.6    2.2e-24   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF08312.2.fs   1/1      99   143 ..     1    46 []    89.6  7.8e-26
PF08312.2.ls   1/1      99   143 ..     1    46 []    91.6  2.2e-24
PF02178.9.ls   2/6    1541  1553 ..     1    13 []     6.0      1.9

Alignments of top-scoring domains:
PF08312.2.fs: domain 1 of 1, from 99 to 143: score 89.6, E = 7.8e-26
                   *->rkpdkEIleHerKRkIEVKclELrdeLEEqGleneeEIEekVnelR<
                      ++p+++Il+HerKR++E++clEL++++EEqG+e e+ I+ekV+++R 
    KIAA0324    99    KRPNPDILDHERKRRVELRCLELEEMMEEQGYE-EQQIQEKVATFR  143  

                   -*
                     
    KIAA0324     -    -    

PF08312.2.ls: domain 1 of 1, from 99 to 143: score 91.6, E = 2.2e-24
                   *->rkpdkEIleHerKRkIEVKclELrdeLEEqGleneeEIEekVnelR<
                      ++p+++Il+HerKR++E++clEL++++EEqG+e e+ I+ekV+++R 
    KIAA0324    99    KRPNPDILDHERKRRVELRCLELEEMMEEQGYE-EQQIQEKVATFR  143  

                   -*
                     
    KIAA0324     -    -    

PF02178.9.ls: domain 2 of 6, from 1541 to 1553: score 6.0, E = 1.9
                   *->kRkRGRPrKaata<-*
                      +R+R R + +++    
    KIAA0324  1541    PRPRSRSPSSPEL    1553 

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