hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23005835/chunk_1/iprscan-20080501-23005835.nocrc
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Query sequence: KIAA0301
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00327                                                  49.0    6.1e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00327    1/1    2996  3177 ..     1   193 []    49.0  6.1e-10

Alignments of top-scoring domains:
SM00327: domain 1 of 1, from 2996 to 3177: score 49.0, E = 6.1e-10
                   *->plDvvfllDgSgSmg.gnrfekvkefv.klveqld...gdrvglvqF
                      ++ +++ +D S+Sm ++ + +++ e +  + ++l+  +  ++++  F
    KIAA0301  2996    QYQICLAIDDSSSMVdNHTKQLAFESLaVIGNALTlleVGQIAVCSF 3042 

                   ssdvrvefpln....sqskdallealaslsykglkdyslgggTnlg.ALq
                   +++v+ + p++++ + +s +++l+  +          +  + T +++ L+
    KIAA0301  3043 GESVKLLHPFHeqfsDYSGSQILRLCK----------FQQKKTKIAqFLE 3082 

                   yalenlfsesag.rrgagratkiS.nvpkvliliTDGesndggddpedil
                    +++++ ++++ +++       iS++  ++l++++DG+  +  +++e++l
    KIAA0301  3083 SVANMFAAAQQLsQN-------ISsETAQLLLVVSDGRGLFL-EGKERVL 3124 

                   eaakelkrsgvkvfvigvgna.....de.elkeiasep.gehvffdvsdv
                    a+++++++++ v+++ ++n +++++  +    i   p++          
    KIAA0301  3125 AAVQAARNANIFVIFVVLDNPssrdsILdIKVPIFKGPgE---------- 3164 

                   edlpslldllidlll<-*
                     +p+++  + ++++   
    KIAA0301  3165 --MPEIRSYMEEFPF    3177 

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