hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22263464/chunk_1/iprscan-20080501-22263464.nocrc
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Query sequence: KIAA0282
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00502                                                 149.0      5e-40   1
SM00336                                                  92.2    6.3e-23   2
SM00060                                                  39.8    3.5e-07   1
SM00184                                                  30.7    0.00019   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1      57   178 ..     1    23 []    30.7  0.00019
SM00336    1/2     210   259 ..     1    51 []    47.0  2.6e-09
SM00336    2/2     271   313 ..     1    51 []    45.2  8.6e-09
SM00502    1/1     320   446 ..     1   132 []   149.0    5e-40
SM00060    1/1     486   569 ..     1    69 []    39.8  3.5e-07

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 57 to 178: score 30.7, E = 0.00019
                   *->CpICle....pvvlpCgH.FCr.Ci......................
                      Cp+C +  ++p++lpC H+ C+ C ++   ++++++++++++  +++
    KIAA0282    57    CPVCGSfyrePIILPCSHnLCQaCArnilvqtpesespqshraagsg 103  

                   ..................................................
                    ++ +  + ++ +  ++ +++ ++ ++  + ++++ ++++++ +  ++  
    KIAA0282   104 vsdydyldldkmslyseadsgygsyggfasapttpcqkspngvrvfppam 153  

                   .....................CPlC<-*
                   +++ ++ ++   + ++++  +CP+C   
    KIAA0282   154 pppathlspalapvprnscitCPQC    178  

SM00336: domain 1 of 2, from 210 to 259: score 47.0, E = 2.6e-09
                   *->eraplCeeHgd.eepaeffCveedgallCrdCdeageHqanklfrgH
                      ++a++C+ +++  ++a+++C e++++++C++C++  +H+++++ ++H
    KIAA0282   210    AAALKCQLCEKaPKEATVMC-EQCDVFYCDPCRLR-CHPPRGPLAKH 254  

                   rvvll<-*
                   r v+    
    KIAA0282   255 RLVPP    259  

SM00336: domain 2 of 2, from 271 to 313: score 45.2, E = 8.6e-09
                   *->eraplCeeHgdeepaeffCveedgallCrdCdeageHqanklfrgHr
                      +++  C+ H+  e   ++C +++ ++ C++C e+g+H      ++H+
    KIAA0282   271    RKVSTCTDHE-LENHSMYC-VQCKMPVCYQCLEEGKH------SSHE 309  

                   vvll<-*
                   v+ l   
    KIAA0282   310 VKAL    313  

SM00502: domain 1 of 1, from 320 to 446: score 149.0, E = 5e-40
                   *->qreaLeelleklrkkaeelekalkqldsiiqevegGqvdenaeevea
                      ++ +L++ l+ l+++a+e+++ l ql++++q+++     en +e+ea
    KIAA0282   320    HKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQ-----ENSVEFEA 361  

                   eikaafdeLrnaLnerkkqLledLeevkenklkkLeqQlesltqkqekle
                   ++ a++d L++aLn+rk+qLl+++++++e+klk+ ++Q+ ++t+k+++++
    KIAA0282   362 CLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTT 411  

                   hainfaeeaLnsgdptelLlskkliierlqellkq<-*
                   ++++++ e ++++dp+ +L++++++i+r++  ++q   
    KIAA0282   412 GLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQ    446  

SM00060: domain 1 of 1, from 486 to 569: score 39.8, E = 3.5e-07
                   *->PgpPsnptelrvtdvtststsdltsvtlsWe.pP.....ivgYr...
                      P p +    l++++  ++++    s+tlsW++pP +  +  gY+ + 
    KIAA0282   486    PVPATPI--LQLEECCTHNN----SATLSWKqPPlstvpADGYIlel 526  

                   ..................ytltgLkPgaepwteYefrVrAvngndaGeg<
                   +++++++ +++ +++++ +t++gL+ +    ++Y+ rV+A+n+   G + 
    KIAA0282   527 ddgnggqfrevyvgketmCTVDGLHFN----STYNARVKAFNK--TGVS  569  

                   -*
                     
    KIAA0282     -    -    

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