hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22013616/chunk_1/iprscan-20080501-22013616.nocrc
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Query sequence: KIAA0267
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00840 b_cpa1: sodium/hydrogen exchanger 3            220.3    1.4e-63   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00840   1/1      61   652 ..     1   627 []   220.3  1.4e-63

Alignments of top-scoring domains:
TIGR00840: domain 1 of 1, from 61 to 652: score 220.3, E = 1.4e-63
                   *->dyehvqkPyeivLwILLaSLaKigfHLt.hkvlrvvPESvLLIvyGl
                       + h q+ +     ILL +L   +  L +h++ r ++E+ L ++yGl
    KIAA0267    61    EESHRQDSANLLIFILLLTLTILTIWLFkHRRARFLHETGLAMIYGL 107  

                   lvGgiikaldh...........HYIidp.....ptLdsslFFlyLLPPIV
                   lvG++ +   h +++ ++ + +  +++++++  +t+d+ +FF++LLPPI+
    KIAA0267   108 LVGLVLRYGIHvpsdvnnvtlsCEVQSSpttllVTFDPEVFFNILLPPII 157  

                   LdAGYfmpkreFfeNLgsILlFAvvGTlinAfvlGlsLYgIcl...iggf
                     AGY++  r Ff NLgsIL +A +GT i+ fv+G ++Yg  +  ++ g 
    KIAA0267   158 FYAGYSLKRRHFFRNLGSILAYAFLGTAISCFVIGSIMYGCVTlmkVTGQ 207  

                   gsidIgLLdnLlFGslISAVDPVaVLavFeElhVnekLyilIFGESLLND
                     +d  + d LlFG+++SA+DPV+VLa+F El V+  Ly l FGES LND
    KIAA0267   208 LAGDFYFTDCLLFGAIVSATDPVTVLAIFHELQVDVELYALLFGESVLND 257  

                   AVtvVLYntfekFiklSDasdeavtivdvveGcvsfFvvtlGvGlLvGVv
                   AV +VL     +     D        +  +++ ++ F+  ++ +   G+ 
    KIAA0267   258 AVAIVLSSSIVAYQPAGDN-SHTFDVTAMFKS-IGIFLGIFSGSFAMGAA 305  

                   fGflvafitrfTkhirYPvIEPlfvllisYlSYLlAEtlhlSGILAlifC
                    G++ a++t+fTk + +   E ++ +l s    LlAE     G +A +fC
    KIAA0267   306 TGVVTALVTKFTKLREFQLLETGLFFLMSWSTFLLAEAWGFTGVVAVLFC 355  

                   GitmkkYveaNiSreSetTikYfmKmlsSlSEtlIFifLGvSlVs.enhe
                   Git  +Y + N S eS+   k  + +l  l+E++IF ++G+ l++ +nh 
    KIAA0267   356 GITQAHYTYNNLSTESQHRTKQLFELLNFLAENFIFSYMGLTLFTfQNHV 405  

                   wnwplaFvvvTlvfCvARWCAVFPLSQFVNWiYRvlgvltLswilNeFrS
                   +n   +Fvv + v +                + R+  +  Ls  lN+ r 
    KIAA0267   406 FNP--TFVVGAFVAIF---------------LGRAANIYPLSLLLNLGR- 437  

                   vkvelpfkDQlvifyaGlRGAVafaLallldekifpaKklFvtTtLvVvf
                      ++  + Q ++ +aGlRGA afaLa  +  +   a     +TtL +vf
    KIAA0267   438 -RSKIGSNFQHMMMFAGLRGAMAFALA--IRDTATYARQMMFSTTLLIVF 484  

                   fTVIfQGlTIkplvevLkvkkddks.kekinEelhlrllDHllpgIEDic
                   fTV ++G+ +  ++ +L ++ +  s+ e +  +   r  +   +      
    KIAA0267   485 FTVWVFGGGTTAMLSCLHIRVGVDSdQEHLGVPENERRTTKAES------ 528  

                   GqygHdklidKlnkfdkkylkkvlirrnspkssikiva....vyhklnlk
                          l   + +fd+ ylk  l+    p+    + a  ++++  l  +
    KIAA0267   529 -----AWLFRMWYNFDHNYLKPLLTHSGPPLTT-TLPAccgpIARCLTSP 572  

                   qaIslvee..........GerrkllsfvgtnStdNivnvDFstPepsnse
                   qa + +e  ++++++   ++   +l+ + +               + n+e
    KIAA0267   573 QAYENQEQlkdddsdlilNDGDISLTYGDS---------------TVNTE 607  

                   pivsYFLREnvsAvglpalSsedkeeeiRdtEDmvtHHiLstnlykprQr
                   p               p++  ++      d         L + l     +
    KIAA0267   608 PA----------TSSAPRRFMGNSS---ED--------ALDRELAFGDHE 636  

                   lqsrYsrhvLkpvpnE<-*
                   l  r  r vL  + +E   
    KIAA0267   637 LVIRGTRLVLPMDDSE    652  

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