hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21515224/chunk_1/iprscan-20080501-21515224.nocrc
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Query sequence: KIAA0261
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07814.3.fs Wings apart-like protein                       934.1          0   1
PF07814.3.ls Wings apart-like protein                       936.1   1.3e-278   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07814.3.fs   1/1     733  1096 ..     1   387 []   934.1        0
PF07814.3.ls   1/1     733  1096 ..     1   387 []   936.1 1.3e-278

Alignments of top-scoring domains:
PF07814.3.fs: domain 1 of 1, from 733 to 1096: score 934.1, E = 0
                   *->VRhVKeanqlqEiGEyQEfdDDveYILSaLqssnAPlkTRCLSAisL
                      V+hVK++n+++E+GE+QEf+DD+eY+LS+L+s++ Pl+TRCLS+isL
    KIAA0261   733    VQHVKHFNDVVEFGENQEFTDDIEYLLSGLKSTQ-PLNTRCLSVISL 778  

                   AtKCmmPaFRmHvRAHGvVtkfFKALsDsqeDdsLgLCTsAimYiLSrDk
                   AtKC+mP+FRmH+RAHG+V+++FK+L+Dsq++++L+LCT+A+mYiLSrD+
    KIAA0261   779 ATKCAMPSFRMHLRAHGMVAMVFKTLDDSQHHQNLSLCTAALMYILSRDR 828  

                   LNmDLDRdSLeLminLLeiekveqasEdklldekdldKvkqkVrELCEei
                   LNmDLDR+SL+Lmi+LLe+e  ++as++kll+ekd++K+k+k+r+LCE++
    KIAA0261   829 LNMDLDRASLDLMIRLLELE--QDASSAKLLNEKDMNKIKEKIRRLCETV 876  

                   kekqevGGkgvHlDlRKeslTtGsLAmEtLLSLTSkRANGdWFKeELRnL
                   ++k        HlDl  e++TtG+LAmEtLLSLTSkRA GdWFKeELR+L
    KIAA0261   877 HNK--------HLDL--ENITTGHLAMETLLSLTSKRA-GDWFKEELRLL 915  

                   GGLeHivkkveeFCvdliaCDnadDWqeklvaslliveRCLRVLEsVsvf
                   GGL+Hiv+kv+e Cvd+++ +++d+  eklvasl+++eRCLRVLEsV+v+
    KIAA0261   916 GGLDHIVDKVKE-CVDHLS-RDEDE--EKLVASLWGAERCLRVLESVTVH 961  

                   NkkNQafLishrsgiLissLakllqvcerriqqypedevkkylSDSKPLP
                   N++NQ++Li++++++Li+s+ak+lq+ce++iqqy+++e++++l+DSKPLP
    KIAA0261   962 NPENQSYLIAYKDSQLIVSSAKALQHCEELIQQYNRAEDSICLADSKPLP 1011 

                   HqNvkehvGvalrdlLapmlrvLINLTHdFddnePslGasklGqqegvie
                   HqNv++hvG+a++d+++++++vL+NLT+d   ne  +G++k+G+q+g+i+
    KIAA0261  1012 HQNVTNHVGKAVEDCMRAIIGVLLNLTND---NE--WGSTKTGEQDGLIG 1056 

                   nalnllLqvAnYlPqecvFDirvLvLtLLiNLversaaNR<-*
                   +aln++Lqv++YlPqe++FDirvL+L+LLiNLve+sa+NR   
    KIAA0261  1057 TALNCVLQVPKYLPQEQRFDIRVLGLGLLINLVEYSARNR    1096 

PF07814.3.ls: domain 1 of 1, from 733 to 1096: score 936.1, E = 1.3e-278
                   *->VRhVKeanqlqEiGEyQEfdDDveYILSaLqssnAPlkTRCLSAisL
                      V+hVK++n+++E+GE+QEf+DD+eY+LS+L+s++ Pl+TRCLS+isL
    KIAA0261   733    VQHVKHFNDVVEFGENQEFTDDIEYLLSGLKSTQ-PLNTRCLSVISL 778  

                   AtKCmmPaFRmHvRAHGvVtkfFKALsDsqeDdsLgLCTsAimYiLSrDk
                   AtKC+mP+FRmH+RAHG+V+++FK+L+Dsq++++L+LCT+A+mYiLSrD+
    KIAA0261   779 ATKCAMPSFRMHLRAHGMVAMVFKTLDDSQHHQNLSLCTAALMYILSRDR 828  

                   LNmDLDRdSLeLminLLeiekveqasEdklldekdldKvkqkVrELCEei
                   LNmDLDR+SL+Lmi+LLe+e  ++as++kll+ekd++K+k+k+r+LCE++
    KIAA0261   829 LNMDLDRASLDLMIRLLELE--QDASSAKLLNEKDMNKIKEKIRRLCETV 876  

                   kekqevGGkgvHlDlRKeslTtGsLAmEtLLSLTSkRANGdWFKeELRnL
                   ++k        HlDl  e++TtG+LAmEtLLSLTSkRA GdWFKeELR+L
    KIAA0261   877 HNK--------HLDL--ENITTGHLAMETLLSLTSKRA-GDWFKEELRLL 915  

                   GGLeHivkkveeFCvdliaCDnadDWqeklvaslliveRCLRVLEsVsvf
                   GGL+Hiv+kv+e Cvd+++ +++d+  eklvasl+++eRCLRVLEsV+v+
    KIAA0261   916 GGLDHIVDKVKE-CVDHLS-RDEDE--EKLVASLWGAERCLRVLESVTVH 961  

                   NkkNQafLishrsgiLissLakllqvcerriqqypedevkkylSDSKPLP
                   N++NQ++Li++++++Li+s+ak+lq+ce++iqqy+++e++++l+DSKPLP
    KIAA0261   962 NPENQSYLIAYKDSQLIVSSAKALQHCEELIQQYNRAEDSICLADSKPLP 1011 

                   HqNvkehvGvalrdlLapmlrvLINLTHdFddnePslGasklGqqegvie
                   HqNv++hvG+a++d+++++++vL+NLT+d   ne  +G++k+G+q+g+i+
    KIAA0261  1012 HQNVTNHVGKAVEDCMRAIIGVLLNLTND---NE--WGSTKTGEQDGLIG 1056 

                   nalnllLqvAnYlPqecvFDirvLvLtLLiNLversaaNR<-*
                   +aln++Lqv++YlPqe++FDirvL+L+LLiNLve+sa+NR   
    KIAA0261  1057 TALNCVLQVPKYLPQEQRFDIRVLGLGLLINLVEYSARNR    1096 

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