# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha07001.fasta.nr -Q ../query/KIAA0247.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0247, 304 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826264 sequences Expectation_n fit: rho(ln(x))= 4.9433+/-0.000186; mu= 11.4337+/- 0.010 mean_var=74.9600+/-14.394, 0's: 38 Z-trim: 44 B-trim: 29 in 1/66 Lambda= 0.148136 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|109084082|ref|XP_001109433.1| PREDICTED: hypoth ( 303) 2009 438.2 8.9e-121 gi|25955694|gb|AAH40401.1| RIKEN cDNA 4933426M11 g ( 302) 1830 399.9 2.9e-109 gi|74224854|dbj|BAE37934.1| unnamed protein produc ( 302) 1821 398.0 1.1e-108 gi|74207253|dbj|BAE30815.1| unnamed protein produc ( 302) 1816 396.9 2.3e-108 gi|148670736|gb|EDL02683.1| RIKEN cDNA 4933426M11, ( 300) 1812 396.1 4.2e-108 gi|26326227|dbj|BAC26857.1| unnamed protein produc ( 323) 1606 352.1 7.8e-95 gi|115530831|emb|CAL49342.1| novel Sushi domain (S ( 304) 1200 265.3 9.9e-69 gi|27924410|gb|AAH44987.1| Kiaa0247-prov protein [ ( 298) 1187 262.5 6.7e-68 gi|28277357|gb|AAH44292.1| MGC53888 protein [Xenop ( 300) 1184 261.9 1e-67 gi|56207620|emb|CAI20595.1| novel protein [Danio r ( 364) 883 197.6 2.8e-48 gi|47230251|emb|CAG10665.1| unnamed protein produc ( 416) 723 163.5 6.1e-38 gi|120537372|gb|AAI29043.1| Zgc:154022 protein [Da ( 231) 522 120.3 3.4e-25 gi|126306875|ref|XP_001367693.1| PREDICTED: simila ( 495) 459 107.1 6.6e-21 gi|37589967|gb|AAH21842.2| Sushi domain containing ( 492) 457 106.7 8.9e-21 gi|126306873|ref|XP_001367649.1| PREDICTED: simila ( 493) 455 106.3 1.2e-20 gi|221040808|dbj|BAH12105.1| unnamed protein produ ( 421) 453 105.8 1.4e-20 gi|81896076|sp|Q8BH32.1|SUSD4_MOUSE RecName: Full= ( 490) 452 105.6 1.9e-20 gi|148681153|gb|EDL13100.1| sushi domain containin ( 491) 452 105.6 1.9e-20 gi|15021831|dbj|BAB62196.1| hypothetical protein [ ( 393) 449 104.9 2.5e-20 gi|221041556|dbj|BAH12455.1| unnamed protein produ ( 330) 448 104.6 2.5e-20 gi|37182113|gb|AAQ88859.1| YHGM196 [Homo sapiens] ( 490) 449 105.0 2.9e-20 gi|109018153|ref|XP_001098978.1| PREDICTED: simila ( 493) 449 105.0 2.9e-20 gi|47224339|emb|CAG09185.1| unnamed protein produc ( 254) 445 103.9 3.2e-20 gi|74747494|sp|Q5VX71.1|SUSD4_HUMAN RecName: Full= ( 490) 448 104.8 3.4e-20 gi|148342576|gb|ABQ59058.1| SUSD4 protein [Homo sa ( 490) 448 104.8 3.4e-20 gi|193788348|dbj|BAG53242.1| unnamed protein produ ( 490) 448 104.8 3.4e-20 gi|149040925|gb|EDL94882.1| similar to RIKEN cDNA ( 490) 447 104.6 3.9e-20 gi|74006403|ref|XP_853550.1| PREDICTED: similar to ( 471) 444 103.9 5.9e-20 gi|109018149|ref|XP_001098775.1| PREDICTED: simila ( 491) 444 103.9 6.1e-20 gi|118087846|ref|XP_001233777.1| PREDICTED: simila ( 403) 442 103.4 7.1e-20 gi|194227328|ref|XP_001500314.2| PREDICTED: simila ( 490) 440 103.1 1.1e-19 gi|151553655|gb|AAI48047.1| SUSD4 protein [Bos tau ( 490) 440 103.1 1.1e-19 gi|75054922|sp|Q5R8M2.1|SUSD4_PONAB RecName: Full= ( 489) 439 102.8 1.3e-19 gi|111308103|gb|AAI21459.1| Toll-like receptor 5 [ ( 477) 437 102.4 1.7e-19 gi|68439713|ref|XP_688793.1| PREDICTED: similar to ( 484) 420 98.8 2.1e-18 gi|116487543|gb|AAI25826.1| Zgc:152863 [Danio reri ( 213) 332 79.7 5.3e-13 gi|149025030|gb|EDL81397.1| rCG20613, isoform CRA_ ( 62) 235 58.5 3.7e-07 gi|47210063|emb|CAF96126.1| unnamed protein produc ( 305) 217 55.2 1.7e-05 >>gi|109084082|ref|XP_001109433.1| PREDICTED: hypothetic (303 aa) initn: 2009 init1: 2009 opt: 2009 Z-score: 2324.6 bits: 438.2 E(): 8.9e-121 Smith-Waterman score: 2009; 98.350% identity (99.340% similar) in 303 aa overlap (2-304:1-303) 10 20 30 40 50 60 KIAA02 KMCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRP 10 20 30 40 50 70 80 90 100 110 120 KIAA02 CRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 SIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEE 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 AVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLC :::::::::::::::::::::::::::::::: :::: :::::::::::::::::::::: gi|109 AVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVSREQQPPDQGACSSAGGEDEAPGQSGLC 180 190 200 210 220 230 250 260 270 280 290 300 KIAA02 EAWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDDIPL :.::::.:::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 EVWGSRGSETVMVHQATTSSWVAGSGNRQLAHKEAADSENSDIQSLLSLTSEEYTDDIPL 240 250 260 270 280 290 KIAA02 LKEA :::: gi|109 LKEA 300 >>gi|25955694|gb|AAH40401.1| RIKEN cDNA 4933426M11 gene (302 aa) initn: 1117 init1: 1117 opt: 1830 Z-score: 2117.9 bits: 399.9 E(): 2.9e-109 Smith-Waterman score: 1830; 89.109% identity (96.700% similar) in 303 aa overlap (2-304:1-302) 10 20 30 40 50 60 KIAA02 KMCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRP ::::.:::::.: :.:.:::::::: :::::.::::::::::::::::::::::::::: gi|259 MCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASVCPLPPEPENGGYICHPRP 10 20 30 40 50 70 80 90 100 110 120 KIAA02 CRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTL :.::::::::::::::::::::::::::::::::: ::::.::.: :::.:: .::::.: gi|259 CKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAMEVSCHLIEDKETH-ALGVPAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 SIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEE :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|259 SIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVSGDQVSIMVDGVQVALPSYEE 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 AVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLC :::::::::.:::::::::::::::.::::..:::::: : :::::::::::::.:::: gi|259 AVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQGQEACSSAGGEDEAPGHSGLC 180 190 200 210 220 230 250 260 270 280 290 300 KIAA02 EAWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDDIPL :::::..:::::::::::::::::::. . .::.:::::::::::::::::::::::::: gi|259 EAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSENSDIQSLLSLTSEEYTDDIPL 240 250 260 270 280 290 KIAA02 LKEA :::: gi|259 LKEA 300 >>gi|74224854|dbj|BAE37934.1| unnamed protein product [M (302 aa) initn: 1108 init1: 1108 opt: 1821 Z-score: 2107.5 bits: 398.0 E(): 1.1e-108 Smith-Waterman score: 1821; 88.779% identity (96.370% similar) in 303 aa overlap (2-304:1-302) 10 20 30 40 50 60 KIAA02 KMCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRP ::::.:::::.: :.:.:::::::: :::::.::::::::::::::::::::::::::: gi|742 MCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASVCPLPPEPENGGYICHPRP 10 20 30 40 50 70 80 90 100 110 120 KIAA02 CRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTL :.::::::::::::::::::::::::::::::::: ::::.::.: :::.:: .::::.: gi|742 CKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAMEVSCHLIEDKETH-ALGVPAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 SIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEE :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|742 SIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVSGDQVSIMVDGVQVALPSYEE 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 AVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLC :::::::::.:::::::::::::::.::::..:::::: : :::::::::::::.:::: gi|742 AVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQGQEACSSAGGEDEAPGHSGLC 180 190 200 210 220 230 250 260 270 280 290 300 KIAA02 EAWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDDIPL :::::..:::::::::::::::::::. . .::.:: ::::::::::::::::::::::: gi|742 EAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTAGSENSDIQSLLSLTSEEYTDDIPL 240 250 260 270 280 290 KIAA02 LKEA :::: gi|742 LKEA 300 >>gi|74207253|dbj|BAE30815.1| unnamed protein product [M (302 aa) initn: 1117 init1: 1117 opt: 1816 Z-score: 2101.7 bits: 396.9 E(): 2.3e-108 Smith-Waterman score: 1816; 88.779% identity (96.370% similar) in 303 aa overlap (2-304:1-302) 10 20 30 40 50 60 KIAA02 KMCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRP ::::.:::::.: :.:.:::::::: :::::.:::::::::::: :::::::::::::: gi|742 MCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASVCPLLPEPENGGYICHPRP 10 20 30 40 50 70 80 90 100 110 120 KIAA02 CRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTL :.::::::::::::::::::::::::::::::::: ::::.::.: :::.:: .::::.: gi|742 CKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAMEVSCHLIEDKETH-ALGVPAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 SIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEE :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|742 SIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVSGDQVSIMVDGVQVALPSYEE 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 AVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLC :::::::::.:::::::::::::::.::::..:::::: : :::::::::::::.:::: gi|742 AVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQGQEACSSAGGEDEAPGHSGLC 180 190 200 210 220 230 250 260 270 280 290 300 KIAA02 EAWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDDIPL :::::..:::::::::::::::::::. . .::.:::::::::::::::::::::::::: gi|742 EAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSENSDIQSLLSLTSEEYTDDIPL 240 250 260 270 280 290 KIAA02 LKEA :::: gi|742 LKEA 300 >>gi|148670736|gb|EDL02683.1| RIKEN cDNA 4933426M11, iso (300 aa) initn: 1117 init1: 1117 opt: 1812 Z-score: 2097.1 bits: 396.1 E(): 4.2e-108 Smith-Waterman score: 1812; 88.779% identity (96.370% similar) in 303 aa overlap (2-304:1-300) 10 20 30 40 50 60 KIAA02 KMCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRP ::::.:::::.: :.:.:::::::: :::::.::::::::::::::::::::::::::: gi|148 MCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASVCPLPPEPENGGYICHPRP 10 20 30 40 50 70 80 90 100 110 120 KIAA02 CRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTL :.::::::::::::::::::::::::::::::::: ::::.::.:: :.:: .::::.: gi|148 CKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAMEVSCHLN--KETH-ALGVPAL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 SIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEE :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|148 SIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVSGDQVSIMVDGVQVALPSYEE 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 AVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLC :::::::::.:::::::::::::::.::::..:::::: : :::::::::::::.:::: gi|148 AVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQGQEACSSAGGEDEAPGHSGLC 180 190 200 210 220 230 250 260 270 280 290 300 KIAA02 EAWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDDIPL :::::..:::::::::::::::::::. . .::.:::::::::::::::::::::::::: gi|148 EAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSENSDIQSLLSLTSEEYTDDIPL 240 250 260 270 280 290 KIAA02 LKEA :::: gi|148 LKEA 300 >>gi|26326227|dbj|BAC26857.1| unnamed protein product [M (323 aa) initn: 1327 init1: 1117 opt: 1606 Z-score: 1858.7 bits: 352.1 E(): 7.8e-95 Smith-Waterman score: 1778; 83.333% identity (90.432% similar) in 324 aa overlap (2-304:1-323) 10 20 30 40 KIAA02 KMCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLAS------------------- ::::.:::::.: :.:.:::::::: :::::.:::::::: gi|263 MCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASGKWMELENILSEVTQTQKD 10 20 30 40 50 50 60 70 80 90 KIAA02 --VCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAM ::::::::::::::::::::.::::::::::::::::::::::::::::::::: ::: gi|263 MHVCPLPPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM 60 70 80 90 100 110 100 110 120 130 140 150 KIAA02 EISCRLNEDKDTHTSLGVPTLSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGV :.::.: :::.:: .::::.::::::::::::::::::::::::::::::::::::.::: gi|263 EVSCHLIEDKETH-ALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGV 120 130 140 150 160 170 160 170 180 190 200 210 KIAA02 SGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLP ::::::::::::::::::::::::::::::.:::::::::::::::.::::..:::::: gi|263 SGDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQ 180 190 200 210 220 230 220 230 240 250 260 270 KIAA02 DQGACSSAGGEDEAPGQSGLCEAWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSE : :::::::::::::.:::::::::..:::::::::::::::::::. . .::.::::: gi|263 GQEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSE 240 250 260 270 280 290 280 290 300 KIAA02 NSDIQSLLSLTSEEYTDDIPLLKEA ::::::::::::::::::::::::: gi|263 NSDIQSLLSLTSEEYTDDIPLLKEA 300 310 320 >>gi|115530831|emb|CAL49342.1| novel Sushi domain (SCR r (304 aa) initn: 1061 init1: 1061 opt: 1200 Z-score: 1390.2 bits: 265.3 E(): 9.9e-69 Smith-Waterman score: 1200; 61.661% identity (79.233% similar) in 313 aa overlap (2-304:1-304) 10 20 30 40 50 KIAA02 KMCHGRIAPKSTSVFAVASVGH-GVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPR : : . :.: .: : :. ... :... .. .:.:::: ::::::::..::: gi|115 MLGGLMEPESPPWVGVWSFGRLRLYMLLLLFHFFVPFALSSVCPPPPEPENGGFLCHPP 10 20 30 40 50 60 70 80 90 100 110 KIAA02 PCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPT :..:::.::::::.::::::::::::.:::::: :.: : ::::::.: .::.:::::: gi|115 HCEQPLTSGSVIEYFCAEGYMLKGDYKFLTCKNGVWSPPMGISCRLNQDTNTHSSLGVPT 60 70 80 90 100 110 120 130 140 150 160 170 KIAA02 LSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYE :::::::::::::::::.::::::::::::::::::. : :. :::::::::::::::: gi|115 LSIVASTASSVALILLLIVLFVLLQPKLKSFHHSRREACVPGEPVSIMVDGVQVALPSYE 120 130 140 150 160 170 180 190 200 210 220 230 KIAA02 EAVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSA---------GGE ::::::.:.:.: :. ::::::::: : :.: .:..:::. : gi|115 EAVYGSAGNCIPSASSRVQIVLSEG--------PSEEQDIQQAVCSSSTTGRNLTGSGTT 180 190 200 210 220 230 240 250 260 270 280 290 KIAA02 DEAPGQSGLCEAWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLT .. :... : :. ::::.::::..:.:: :. .. :. .: ::::.::.::::::. gi|115 GHSHGHASQSSAGCSQHSETVLVHQASSSQWVLGAESQTLS-REGADSESSDVQSLLSLS 240 250 260 270 280 290 300 KIAA02 SEEYTDDIPLLKEA :::::::::::::: gi|115 SEEYTDDIPLLKEA 300 >>gi|27924410|gb|AAH44987.1| Kiaa0247-prov protein [Xeno (298 aa) initn: 1069 init1: 903 opt: 1187 Z-score: 1375.3 bits: 262.5 E(): 6.7e-68 Smith-Waterman score: 1187; 62.013% identity (80.519% similar) in 308 aa overlap (2-304:1-298) 10 20 30 40 50 60 KIAA02 KMCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRP : .: . :.: ::.: :. ... :... .. .:.:.:: ::::::::..::: gi|279 MLRGIMEPESPPWVAVSSFGR-LYMFLLLFHFFVPFALTSACPPPPEPENGGFLCHPPH 10 20 30 40 50 70 80 90 100 110 120 KIAA02 CRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTL :..:: .::::::.::::::::::::.:::::: :.: : ::::::.: .::.::.:::: gi|279 CEQPLISGSVIEYFCAEGYMLKGDYKFLTCKNGVWSPPMGISCRLNQDTNTHSSLSVPTL 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 SIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEE ::::::::::::::::::::::::::::::.::::. : :.:::::::::::::::::: gi|279 SIVASTASSVALILLLVVLFVLLQPKLKSFQHSRREACVPGEQVSIMVDGVQVALPSYEE 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 AVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLC :::::.:.:.: :. ::::::::: : :.: .:..:::. . ... gi|279 AVYGSAGNCIPSASSRVQIVLSEG--------PSEEQEIQQATCSSSTTSHNLMSSGTTV 180 190 200 210 220 230 250 260 270 280 290 KIAA02 EAWG-----SRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYT .. : :. ::::.::::. :.:: :. .. :. .: :::::::.::::::.::::: gi|279 HGHGQPSQSSQHSETVLVHQASPSQWVLGAESQTLS-REGADSENSDVQSLLSLSSEEYT 240 250 260 270 280 300 KIAA02 DDIPLLKEA ::::::::: gi|279 DDIPLLKEA 290 >>gi|28277357|gb|AAH44292.1| MGC53888 protein [Xenopus l (300 aa) initn: 1140 init1: 917 opt: 1184 Z-score: 1371.8 bits: 261.9 E(): 1e-67 Smith-Waterman score: 1184; 62.460% identity (80.906% similar) in 309 aa overlap (7-304:1-300) 10 20 30 40 50 KIAA02 KMCHGRIAPKSTSVFAVASVGH-GVFLPLVILCTLLGDGLAS--VCPLPPEPENGGYICH . :.: ::.: :. ... :... .. .:.: ::: ::::::::..:: gi|282 MEPESPPWVAVSSFGRLKLYMLLLLFQYFVPFALSSGLVCPPPPEPENGGFLCH 10 20 30 40 50 60 70 80 90 100 110 KIAA02 PRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGV : :..:::.::::::.::::::::::::.::::.: :.: : ::::::.: .::.:::: gi|282 PPHCEQPLTSGSVIEYFCAEGYMLKGDYKFLTCKSGVWSPPMGISCRLNQDTNTHSSLGV 60 70 80 90 100 110 120 130 140 150 160 170 KIAA02 PTLSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPS :::::::::::::::::::.::::::::::::::::::. .: :.::::::::::::::: gi|282 PTLSIVASTASSVALILLLIVLFVLLQPKLKSFHHSRREASVPGEQVSIMVDGVQVALPS 120 130 140 150 160 170 180 190 200 210 220 230 KIAA02 YEEAVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSA-------GGE ::::::::.:.:.: :. ::::::::: : :.: .:.::::. :. gi|282 YEEAVYGSAGNCIPTASSRVQIVLSEG--------PSEEQDIQQAACSSSTTGQNLIGSG 180 190 200 210 220 240 250 260 270 280 KIAA02 DEAPGQSGLCEAWGSRASETVMVHQATTSS-WVAGSGNRQLAHKETADSENSDIQSLLSL . :... : .:. ::::.::::..:: :: .. .. :. .: :::::::..::::: gi|282 TIGHGHASQSSAGSSQHSETVLVHQASSSSQWVLAAESHTLS-REGADSENSDVHSLLSL 230 240 250 260 270 280 290 300 KIAA02 TSEEYTDDIPLLKEA .:::::::::::::: gi|282 SSEEYTDDIPLLKEA 290 300 >>gi|56207620|emb|CAI20595.1| novel protein [Danio rerio (364 aa) initn: 514 init1: 416 opt: 883 Z-score: 1023.0 bits: 197.6 E(): 2.8e-48 Smith-Waterman score: 885; 56.071% identity (72.143% similar) in 280 aa overlap (37-304:100-364) 10 20 30 40 50 60 KIAA02 IAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRPCRDPLT ::. .:: : ::::::: ::: ::. :: gi|562 DPGYTLDGVSMISCTVTGQWSSNPPRCIKNDGMYDVCQPPSEPENGGYNCHPSPCHR-LT 70 80 90 100 110 120 70 80 90 100 110 120 KIAA02 AGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTLSIVAST :.::::.: :::.::: :.. ::..:::. :.:::. . .. :.:: .:.::::::: gi|562 QGTVIEYFCDEGYILKGGYQFRTCESGEWNSPMQISCHPVQGEEQHSSLPMPALSIVAST 130 140 150 160 170 180 130 140 150 160 170 180 KIAA02 ASSVALILLLVVLFVLLQPKLKSFHHSR-RDQGVSGDQVSIMVDGVQVALPSYEEAVYGS :::::::::::::::::::::::::::: :.:::::.. :.:: ::::.::::::::::. gi|562 ASSVALILLLVVLFVLLQPKLKSFHHSRSREQGVSGQHSSMMVGGVQVSLPSYEEAVYGA 190 200 210 220 230 240 190 200 210 220 230 240 KIAA02 SGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLCEAWGS .: ::: . ::::::::: . : :: . . :.. : ..: :.: gi|562 GGTSVPPPESRVQIVLSEGPQAEALHEPLEQAQASYSFPSTS-----AAASS--CHA--- 250 260 270 280 290 250 260 270 280 290 KIAA02 RASETVMVHQATTSS---------W-VAGSGNRQLAHKETADSENSDIQSLLSLTS-EEY :::.:::.. :: : : : :.. . ::.:: .::::.:: :.: gi|562 ---ETVLVHQVACSSSPSSSSSPSWAVEQPGAAAPLHRQQS-SESSDQHSLLSVTSAEDY 300 310 320 330 340 350 300 KIAA02 TDDIPLLKEA ::::::::: gi|562 GDDIPLLKEA 360 304 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 07:25:39 2009 done: Wed Mar 4 07:30:48 2009 Total Scan time: 1394.990 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]