hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20592182/chunk_1/iprscan-20080501-20592182.nocrc
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Query sequence: KIAA0231
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00369                                                 104.8    9.9e-27   8

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00369      1/8     529   556 ..     1    24 []     1.9  2.4e+02
SM00369      2/8     604   627 ..     1    24 []    14.0      8.2
SM00369      3/8     629   650 ..     1    24 []     0.2  3.9e+02
SM00369      4/8     652   674 ..     1    24 []     9.0       33
SM00369      5/8     675   698 ..     1    24 []    24.1    0.019
SM00369      6/8     699   720 ..     1    24 []     8.7       36
SM00369      7/8     721   744 ..     1    24 []    25.3   0.0082
SM00369      8/8     767   790 ..     1    24 []    21.5     0.12

Alignments of top-scoring domains:
SM00369: domain 1 of 8, from 529 to 556: score 1.9, E = 2.4e+02
                   *->LpnLreLdLsnNqL....tsLPpgaFqg<-*
                      L nL+eL+Ls+  L+++ ++   + Fq+   
    KIAA0231   529    LKNLKELYLSGCVLpeqlSTMQLEGFQD    556  

SM00369: domain 2 of 8, from 604 to 627: score 14.0, E = 8.2
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      ++nL++L L +  L+++P+ +F+    
    KIAA0231   604    MVNLKSLELISCDLERIPHSIFSL    627  

SM00369: domain 3 of 8, from 629 to 650: score 0.2, E = 3.9e+02
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                        nL eLdL  N+L+++ + +      
    KIAA0231   629    --NLHELDLRENNLKTVEEIISFQ    650  

SM00369: domain 4 of 8, from 652 to 674: score 9.0, E = 33
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L nL  L L +N++  +P+++ +    
    KIAA0231   652    LQNLSCLKLWHNNIAYIPAQI-GA    674  

SM00369: domain 5 of 8, from 675 to 698: score 24.1, E = 0.019
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L+nL+ L+L++N+++ LP ++F +   
    KIAA0231   675    LSNLEQLSLDHNNIENLPLQLFLC    698  

SM00369: domain 6 of 8, from 699 to 720: score 8.7, E = 36
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                       ++L  LdLs+N+Lt +P+++ q    
    KIAA0231   699    -TKLHYLDLSYNHLTFIPEEI-QY    720  

SM00369: domain 7 of 8, from 721 to 744: score 25.3, E = 0.0082
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L+nL+     nN+++ LP+g+Fq+   
    KIAA0231   721    LSNLQYFAVTNNNIEMLPDGLFQC    744  

SM00369: domain 8 of 8, from 767 to 790: score 21.5, E = 0.12
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L+nL++L L +N L++LPp++ ++   
    KIAA0231   767    LSNLTHLELIGNYLETLPPELEGC    790  

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