hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19574248/chunk_1/iprscan-20080501-19574248.nocrc
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Query sequence: KIAA0194
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00398                                                  68.7    7.1e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00398    1/1     184   254 ..     1    71 []    68.7  7.1e-16

Alignments of top-scoring domains:
SM00398: domain 1 of 1, from 184 to 254: score 68.7, E = 7.1e-16
                   *->kpKrPmsafmlFsqenRakikkenPdlknaeisKklgerWkeLseee
                      k+K+P+sa++l++ + + k+++e P+l+++ei+Kk++e W++Ls +e
    KIAA0194   184    KTKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAE 230  

                   KapYeekAekdkeryekempeykk<-*
                   + +Y ekA+ +ke  + + +       
    KIAA0194   231 RSYYLEKAKLEKEGLDPNSKLSAL    254  

//