hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-18345573/chunk_1/iprscan-20080501-18345573.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0144 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00627.21.fs UBA/TS-N domain 45.6 2.3e-12 1 PF00627.21.ls UBA/TS-N domain 47.6 3.9e-11 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00627.21.fs 1/1 49 89 .. 1 41 [] 45.6 2.3e-12 PF00627.21.ls 1/1 49 89 .. 1 41 [] 47.6 3.9e-11 Alignments of top-scoring domains: PF00627.21.fs: domain 1 of 1, from 49 to 89: score 45.6, E = 2.3e-12 *->ideeavkqLreMTGfdreeakkALeatngnverAvewLleh<-* ee+vkqL++ TG +++e++ AL +ng+v+rA++ Lle+ KIAA0144 49 DFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEG 89 PF00627.21.ls: domain 1 of 1, from 49 to 89: score 47.6, E = 3.9e-11 *->ideeavkqLreMTGfdreeakkALeatngnverAvewLleh<-* ee+vkqL++ TG +++e++ AL +ng+v+rA++ Lle+ KIAA0144 49 DFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEG 89 //