hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17533797/chunk_1/iprscan-20080501-17533797.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0119
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF00248.11.ls Aldo/keto reductase family                 532.8   3.3e-157   1
PF00248.11.fs Aldo/keto reductase family                 531.0   1.1e-156   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF00248.11.fs   1/1      12   303 ..     1   361 []   531.0 1.1e-156
PF00248.11.ls   1/1      12   303 ..     1   361 []   532.8 3.3e-157

Alignments of top-scoring domains:
PF00248.11.fs: domain 1 of 1, from 12 to 303: score 531.0, E = 1.1e-156
                   *->LnnGlklemPllGlGtwqtpgwgrvdkeeakeavkaAldaGYRhiDt
                      Ln+G+   mP+lG+Gt+ +p+   v++  a e+ k A++aG+RhiD 
    KIAA0119    12    LNDGH--FMPVLGFGTYAPPE---VPRSKALEVTKLAIEAGFRHIDS 53   

                   AaiYgNGQkPgkSEeevGeaikealeegsvvVitkykRediFitsgKlwn
                   A+ Y+N       Ee+vG+ai++++++gsv      kRediF+ts Klw 
    KIAA0119    54 AHLYNN-------EEQVGLAIRSKIADGSV------KREDIFYTS-KLWS 89   

                   tfpedlieyghspkhvrealekSLkrLgLdYvDLyLiHwPdpfkpgiedk
                   tf        h+p++vr+ale+SLk+ +LdYvDLyLiH P+++kpg  ++
    KIAA0119    90 TF--------HRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPG--EE 129  

                   yplgfptdddgkliyedvpieetWkaleklvdeGkvrsIGVSNfsaeqle
                    +   ptd++gk+i++ v+++ tW+a+ek++d+G+++sIGVSNf+ +qle
    KIAA0119   130 LS---PTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLE 176  

                   ellsyagklklipPvvnQvElHPylqqdelrkvPLLpfCkshGIavtAyS
                    +l+++g lk ++Pv+nQvE+HPy+++ +l++     fCks++I+++AyS
    KIAA0119   177 MILNKPG-LK-YKPVCNQVECHPYFNRSKLLD-----FCKSKDIVLVAYS 219  

                   PLGsglLtgkyteedlipgdsrrsllgadkgwsdlgspelledpvlkaiA
                    LGs++                      dk w+d++sp+lledpvl+a+A
    KIAA0119   220 ALGSQR----------------------DKRWVDPNSPVLLEDPVLCALA 247  

                   ekygykktpAQvaLrWalqrGggpgvvvvIPKSvnpeRikeNlkvfddfe
                   +k++  +tpA +aLr++lqrG     vvv++KS+n++Ri++N++vf +f+
    KIAA0119   248 KKHK--RTPALIALRYQLQRG-----VVVLAKSYNEQRIRQNVQVF-EFQ 289  

                   Lteedmkkideldr<-*
                   Lt edmk+id+ldr   
    KIAA0119   290 LTAEDMKAIDGLDR    303  

PF00248.11.ls: domain 1 of 1, from 12 to 303: score 532.8, E = 3.3e-157
                   *->LnnGlklemPllGlGtwqtpgwgrvdkeeakeavkaAldaGYRhiDt
                      Ln+G+   mP+lG+Gt+ +p+   v++  a e+ k A++aG+RhiD 
    KIAA0119    12    LNDGH--FMPVLGFGTYAPPE---VPRSKALEVTKLAIEAGFRHIDS 53   

                   AaiYgNGQkPgkSEeevGeaikealeegsvvVitkykRediFitsgKlwn
                   A+ Y+N       Ee+vG+ai++++++gsv      kRediF+ts Klw 
    KIAA0119    54 AHLYNN-------EEQVGLAIRSKIADGSV------KREDIFYTS-KLWS 89   

                   tfpedlieyghspkhvrealekSLkrLgLdYvDLyLiHwPdpfkpgiedk
                   tf        h+p++vr+ale+SLk+ +LdYvDLyLiH P+++kpg  ++
    KIAA0119    90 TF--------HRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPG--EE 129  

                   yplgfptdddgkliyedvpieetWkaleklvdeGkvrsIGVSNfsaeqle
                    +   ptd++gk+i++ v+++ tW+a+ek++d+G+++sIGVSNf+ +qle
    KIAA0119   130 LS---PTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLE 176  

                   ellsyagklklipPvvnQvElHPylqqdelrkvPLLpfCkshGIavtAyS
                    +l+++g lk ++Pv+nQvE+HPy+++ +l++     fCks++I+++AyS
    KIAA0119   177 MILNKPG-LK-YKPVCNQVECHPYFNRSKLLD-----FCKSKDIVLVAYS 219  

                   PLGsglLtgkyteedlipgdsrrsllgadkgwsdlgspelledpvlkaiA
                    LGs++                      dk w+d++sp+lledpvl+a+A
    KIAA0119   220 ALGSQR----------------------DKRWVDPNSPVLLEDPVLCALA 247  

                   ekygykktpAQvaLrWalqrGggpgvvvvIPKSvnpeRikeNlkvfddfe
                   +k++  +tpA +aLr++lqrG     vvv++KS+n++Ri++N++vf +f+
    KIAA0119   248 KKHK--RTPALIALRYQLQRG-----VVVLAKSYNEQRIRQNVQVF-EFQ 289  

                   Lteedmkkideldr<-*
                   Lt edmk+id+ldr   
    KIAA0119   290 LTAEDMKAIDGLDR    303  

//