# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha00666.fasta.nr -Q ../query/KIAA0110.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0110, 275 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7827212 sequences Expectation_n fit: rho(ln(x))= 4.6977+/-0.00018; mu= 11.2888+/- 0.010 mean_var=63.8960+/-12.297, 0's: 44 Z-trim: 45 B-trim: 13 in 1/65 Lambda= 0.160449 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|194386202|dbj|BAG59665.1| unnamed protein produ ( 293) 1860 438.9 4.8e-121 gi|48145903|emb|CAG33174.1| MAD2L1BP [Homo sapiens ( 274) 1856 437.9 8.6e-121 gi|114607564|ref|XP_518498.2| PREDICTED: MAD2L1 bi ( 274) 1843 434.9 7e-120 gi|109071293|ref|XP_001096335.1| PREDICTED: MAD2L1 ( 274) 1796 424.1 1.3e-116 gi|51243063|ref|NP_001003690.1| MAD2L1 binding pro ( 306) 1776 419.5 3.5e-115 gi|114607562|ref|XP_001139524.1| PREDICTED: MAD2L1 ( 306) 1759 415.5 5.4e-114 gi|149732230|ref|XP_001502188.1| PREDICTED: simila ( 274) 1665 393.7 1.8e-107 gi|73973004|ref|XP_532151.2| PREDICTED: similar to ( 274) 1646 389.3 3.7e-106 gi|194039367|ref|XP_001929550.1| PREDICTED: simila ( 274) 1610 381.0 1.2e-103 gi|109939826|gb|AAI18447.1| MAD2L1 binding protein ( 274) 1607 380.3 1.9e-103 gi|166235394|pdb|2QYF|B Chain B, Crystal Structure ( 240) 1593 377.0 1.7e-102 gi|56971334|gb|AAH88268.1| MAD2L1 binding protein ( 277) 1477 350.2 2.2e-94 gi|13543201|gb|AAH05768.1| MAD2L1 binding protein ( 276) 1427 338.6 6.8e-91 gi|12832315|dbj|BAB22054.1| unnamed protein produc ( 276) 1426 338.4 8e-91 gi|46577120|sp|Q9DCX1.2|MD2BP_MOUSE RecName: Full= ( 276) 1424 337.9 1.1e-90 gi|126310090|ref|XP_001366235.1| PREDICTED: hypoth ( 283) 1308 311.1 1.4e-82 gi|149599701|ref|XP_001514387.1| PREDICTED: hypoth ( 325) 1111 265.6 8.1e-69 gi|12846893|dbj|BAB27350.1| unnamed protein produc ( 276) 1000 239.8 3.9e-61 gi|50740573|ref|XP_419498.1| PREDICTED: hypothetic ( 275) 942 226.4 4.2e-57 gi|189527416|ref|XP_001923296.1| PREDICTED: simila ( 385) 651 159.1 1e-36 gi|210085758|gb|EEA34209.1| hypothetical protein B ( 239) 579 142.3 7.5e-32 gi|210122172|gb|EEA69880.1| hypothetical protein B ( 237) 574 141.1 1.7e-31 gi|115891477|ref|XP_001199216.1| PREDICTED: simila ( 161) 330 84.5 1.3e-14 gi|156227729|gb|EDO48531.1| predicted protein [Nem ( 252) 253 66.9 4.1e-09 >>gi|194386202|dbj|BAG59665.1| unnamed protein product [ (293 aa) initn: 1860 init1: 1860 opt: 1860 Z-score: 2329.4 bits: 438.9 E(): 4.8e-121 Smith-Waterman score: 1860; 99.636% identity (100.000% similar) in 275 aa overlap (1-275:19-293) 10 20 30 40 KIAA01 VMAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQE :::::::::::::::::::::::::::::::::::::::::: gi|194 MMPRETFILTARSSGGEVVMAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQE 10 20 30 40 50 60 50 60 70 80 90 100 KIAA01 PLNASEAFCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PLNASEAFCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKP 70 80 90 100 110 120 110 120 130 140 150 160 KIAA01 SPQAEEMLKKKPRATTEVSSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|194 SPQAEEMLKKKPRATTEVSSRKCQQALAELEGVLSHLEDFFARTLVPRVLILLGGNALSP 130 140 150 160 170 180 170 180 190 200 210 220 KIAA01 KEFYELDLSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KEFYELDLSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNC 190 200 210 220 230 240 230 240 250 260 270 KIAA01 GEDWFRPKLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GEDWFRPKLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE 250 260 270 280 290 >>gi|48145903|emb|CAG33174.1| MAD2L1BP [Homo sapiens] (274 aa) initn: 1856 init1: 1856 opt: 1856 Z-score: 2324.8 bits: 437.9 E(): 8.6e-121 Smith-Waterman score: 1856; 99.635% identity (100.000% similar) in 274 aa overlap (2-275:1-274) 10 20 30 40 50 60 KIAA01 VMAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQEPLNASEAFCPRDCMVPVV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 MAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQEPLNASEAFCPRDCMVPVV 10 20 30 40 50 70 80 90 100 110 120 KIAA01 FPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 FPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEV 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 SSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQ 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGH 180 190 200 210 220 230 250 260 270 KIAA01 KLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE ::::::::::::::::::::::::::::::::::. gi|481 KLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRD 240 250 260 270 >>gi|114607564|ref|XP_518498.2| PREDICTED: MAD2L1 bindin (274 aa) initn: 1843 init1: 1843 opt: 1843 Z-score: 2308.5 bits: 434.9 E(): 7e-120 Smith-Waterman score: 1843; 98.905% identity (99.635% similar) in 274 aa overlap (2-275:1-274) 10 20 30 40 50 60 KIAA01 VMAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQEPLNASEAFCPRDCMVPVV :::::::::::::::::::.:::::::::::::::::: :::::::::::::::::::: gi|114 MAAPEAEVLSSAAVPDLEWFEKSEETHASQIELLETSSMQEPLNASEAFCPRDCMVPVV 10 20 30 40 50 70 80 90 100 110 120 KIAA01 FPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEV 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQ 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGH 180 190 200 210 220 230 250 260 270 KIAA01 KLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE :::::::::::::::::::::::::::::.::::: gi|114 KLTVTLSCGRPSIRTTAWEDYIWFQAPVTLKGFRE 240 250 260 270 >>gi|109071293|ref|XP_001096335.1| PREDICTED: MAD2L1 bin (274 aa) initn: 1796 init1: 1796 opt: 1796 Z-score: 2249.7 bits: 424.1 E(): 1.3e-116 Smith-Waterman score: 1796; 95.255% identity (98.905% similar) in 274 aa overlap (2-275:1-274) 10 20 30 40 50 60 KIAA01 VMAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQEPLNASEAFCPRDCMVPVV :::::::::: :.::::::::::::::::::::::::::::::: :: ::::::.:::: gi|109 MAAPEAEVLSPASVPDLEWYEKSEETHASQIELLETSSTQEPLNPSEPFCPRDCIVPVV 10 20 30 40 50 70 80 90 100 110 120 KIAA01 FPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEV ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|109 FPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKNFYRKPSPQAEEMLKKKPRATTEV 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQ ::::::::.:::::::::::::::::::::::::::::.::::::::::::::::::::: gi|109 SSRKCQQAVAELESVLSHLEDFFARTLVPRVLILLGGNSLSPKEFYELDLSLLAPYSVDQ 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGH ::::::::::::::::::::::::::::::::..::::::.::::::.:::::::::::: gi|109 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTIIMAQGHRDCGEDWFQPKLNYRVPSRGH 180 190 200 210 220 230 250 260 270 KIAA01 KLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE :::::::::::::::::::::::::::::.::::: gi|109 KLTVTLSCGRPSIRTTAWEDYIWFQAPVTLKGFRE 240 250 260 270 >>gi|51243063|ref|NP_001003690.1| MAD2L1 binding protein (306 aa) initn: 1776 init1: 1776 opt: 1776 Z-score: 2224.0 bits: 419.5 E(): 3.5e-115 Smith-Waterman score: 1776; 98.859% identity (99.240% similar) in 263 aa overlap (13-275:44-306) 10 20 30 40 KIAA01 VMAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQE : . :::::::::::::::::::::::::: gi|512 PRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLEWYEKSEETHASQIELLETSSTQE 20 30 40 50 60 70 50 60 70 80 90 100 KIAA01 PLNASEAFCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 PLNASEAFCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKP 80 90 100 110 120 130 110 120 130 140 150 160 KIAA01 SPQAEEMLKKKPRATTEVSSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 SPQAEEMLKKKPRATTEVSSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSP 140 150 160 170 180 190 170 180 190 200 210 220 KIAA01 KEFYELDLSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 KEFYELDLSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNC 200 210 220 230 240 250 230 240 250 260 270 KIAA01 GEDWFRPKLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 GEDWFRPKLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE 260 270 280 290 300 >>gi|114607562|ref|XP_001139524.1| PREDICTED: MAD2L1 bin (306 aa) initn: 1759 init1: 1759 opt: 1759 Z-score: 2202.8 bits: 415.5 E(): 5.4e-114 Smith-Waterman score: 1759; 97.719% identity (98.859% similar) in 263 aa overlap (13-275:44-306) 10 20 30 40 KIAA01 VMAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQE : . ::::.:::::::::::::::::: :: gi|114 PRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIIDLEWFEKSEETHASQIELLETSSMQE 20 30 40 50 60 70 50 60 70 80 90 100 KIAA01 PLNASEAFCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PLNASEAFCPRDCMVPVVFPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKP 80 90 100 110 120 130 110 120 130 140 150 160 KIAA01 SPQAEEMLKKKPRATTEVSSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SPQAEEMLKKKPRATTEVSSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSP 140 150 160 170 180 190 170 180 190 200 210 220 KIAA01 KEFYELDLSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KEFYELDLSLLAPYSVDQSLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNC 200 210 220 230 240 250 230 240 250 260 270 KIAA01 GEDWFRPKLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE :::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|114 GEDWFRPKLNYRVPSRGHKLTVTLSCGRPSIRTTAWEDYIWFQAPVTLKGFRE 260 270 280 290 300 >>gi|149732230|ref|XP_001502188.1| PREDICTED: similar to (274 aa) initn: 1665 init1: 1665 opt: 1665 Z-score: 2085.8 bits: 393.7 E(): 1.8e-107 Smith-Waterman score: 1665; 87.956% identity (95.620% similar) in 274 aa overlap (2-275:1-274) 10 20 30 40 50 60 KIAA01 VMAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQEPLNASEAFCPRDCMVPVV ::::: :::: ::::::::::::::::: :::::::.:. .: : :: ::::::::::: gi|149 MAAPEPEVLSPAAVPDLEWYEKSEETHAPQIELLETTSAPQPPNPSEPFCPRDCMVPVV 10 20 30 40 50 70 80 90 100 110 120 KIAA01 FPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEV :::::::::::.:::::::::::::::::::::::::::::::::::...:::::::... gi|149 FPGPVSQEGCCRFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEDVVKKKPRATADM 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQ .::::::::::::::.:::: .:::::::::::::::.:.::::::::::: ::: :.:: gi|149 GSRKCQQALAELESVFSHLEGLFARTLVPRVLILLGGSAVSPKEFYELDLSRLAPNSMDQ 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGH ::::::::::::::::::::::::::::::::.:::::::.::::::::::::::::::: gi|149 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTIVMAQGHRDCGEDWFRPKLNYRVPSRGH 180 190 200 210 220 230 250 260 270 KIAA01 KLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE :::::::::: :: .::::::::::::::.:::.: gi|149 KLTVTLSCGRASIPATAWEDYIWFQAPVTLKGFHE 240 250 260 270 >>gi|73973004|ref|XP_532151.2| PREDICTED: similar to MAD (274 aa) initn: 1646 init1: 1646 opt: 1646 Z-score: 2062.1 bits: 389.3 E(): 3.7e-106 Smith-Waterman score: 1646; 87.956% identity (94.161% similar) in 274 aa overlap (2-275:1-274) 10 20 30 40 50 60 KIAA01 VMAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQEPLNASEAFCPRDCMVPVV :::: ::: ::::::::::::::::: :::::::.::::: : :: : ::.:::::: gi|739 MAAPGPEVLCPAAVPDLEWYEKSEETHAPQIELLETTSTQEPPNPSEPFYPRNCMVPVV 10 20 30 40 50 70 80 90 100 110 120 KIAA01 FPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEV :::::::::::.:::::::::::::::::::::::::::::::::::. .::: ::..:. gi|739 FPGPVSQEGCCRFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEDAMKKKARAAAEM 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQ :::::::::::::::::::: .:::::::::::::::.::::::::::::: ::: :.:: gi|739 SSRKCQQALAELESVLSHLEGLFARTLVPRVLILLGGSALSPKEFYELDLSRLAPNSMDQ 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGH ::::::::::::::::::::::::::::::::.:::::::.:::::::::::::::.::: gi|739 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTIVMAQGHRDCGEDWFRPKLNYRVPNRGH 180 190 200 210 220 230 250 260 270 KIAA01 KLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE :::::::::: :: :::::::.:::::::.:::.: gi|739 KLTVTLSCGRSSIPTTAWEDYVWFQAPVTLKGFHE 240 250 260 270 >>gi|194039367|ref|XP_001929550.1| PREDICTED: similar to (274 aa) initn: 1610 init1: 1610 opt: 1610 Z-score: 2017.0 bits: 381.0 E(): 1.2e-103 Smith-Waterman score: 1610; 86.131% identity (93.796% similar) in 274 aa overlap (2-275:1-274) 10 20 30 40 50 60 KIAA01 VMAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQEPLNASEAFCPRDCMVPVV ::::: :: : .:: ::: ::::::: :::::::.:.::: : :: . ::::::::: gi|194 MAAPEPEVQSPVAVSGLEWCEKSEETHDPQIELLETTSAQEPPNPSEPLRPRDCMVPVV 10 20 30 40 50 70 80 90 100 110 120 KIAA01 FPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEV :::::::::::.:::::::::::::::::::::::::::::::::::.:.:::::::.:. gi|194 FPGPVSQEGCCRFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEDMVKKKPRATAEA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQ :.:::::.:.:::::::::: .::::::::::::::::::::::::::::: ::: :.: gi|194 SNRKCQQTLVELESVLSHLEGLFARTLVPRVLILLGGNALSPKEFYELDLSRLAPNSMDP 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGH :::::::::::::::::::::::::.::::::.:::::::.::::::::::::::::::: gi|194 SLSTAACLRRLFRAIFMADAFSELQVPPLMGTIVMAQGHRDCGEDWFRPKLNYRVPSRGH 180 190 200 210 220 230 250 260 270 KIAA01 KLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE :::::::::.:.: :::::::::::::::.:::.: gi|194 KLTVTLSCGQPAIPTTAWEDYIWFQAPVTLKGFHE 240 250 260 270 >>gi|109939826|gb|AAI18447.1| MAD2L1 binding protein [Bo (274 aa) initn: 1607 init1: 1607 opt: 1607 Z-score: 2013.3 bits: 380.3 E(): 1.9e-103 Smith-Waterman score: 1607; 85.766% identity (93.431% similar) in 274 aa overlap (2-275:1-274) 10 20 30 40 50 60 KIAA01 VMAAPEAEVLSSAAVPDLEWYEKSEETHASQIELLETSSTQEPLNASEAFCPRDCMVPVV ::::: :: :.:::::: ::::::. :::::::.::::: : : : ::::::::: gi|109 MAAPEPEVQPPATVPDLEWCEKSEETQDPQIELLETTSTQEPPNPLEPFRPRDCMVPVV 10 20 30 40 50 70 80 90 100 110 120 KIAA01 FPGPVSQEGCCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEV :::::::::::.:::::::::::::::::::::::::::::: ::::...:::::::.:: gi|109 FPGPVSQEGCCRFTCELLKHIMYQRQQLPLPYEQLKHFYRKPFPQAEDVVKKKPRATAEV 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNALSPKEFYELDLSLLAPYSVDQ :::::::.:::::::::::: .::::::::::::::::::::::::::::: ::: :.: gi|109 SSRKCQQTLAELESVLSHLEGLFARTLVPRVLILLGGNALSPKEFYELDLSRLAPNSMDP 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 SLSTAACLRRLFRAIFMADAFSELQAPPLMGTVVMAQGHRNCGEDWFRPKLNYRVPSRGH ::::::::::::::::.::::::::.::::::.:::::::.::::::::::::::::::: gi|109 SLSTAACLRRLFRAIFLADAFSELQVPPLMGTIVMAQGHRDCGEDWFRPKLNYRVPSRGH 180 190 200 210 220 230 250 260 270 KIAA01 KLTVTLSCGRPSIRTTAWEDYIWFQAPVTFKGFRE :::::::::::.: .:.::::::::::.:.:::.: gi|109 KLTVTLSCGRPAIPATTWEDYIWFQAPLTLKGFHE 240 250 260 270 275 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 21:37:37 2009 done: Tue Mar 3 21:42:53 2009 Total Scan time: 1347.650 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]