hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17153951/chunk_1/iprscan-20080501-17153951.nocrc
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Query sequence: KIAA0096
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 366.2   2.1e-105   1
SM00219                                                  69.4    4.4e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1      17   270 ..     1   280 []    69.4  4.4e-16
SM00220    1/1      17   270 ..     1   231 []   366.2 2.1e-105

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 17 to 270: score 69.4, E = 4.4e-16
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda.....keeFlr
                        l+k+LG+G+F +V +++   ++++VAVK++ + + ++     + +
    KIAA0096    17    YDLDKTLGRGHFAVVKLARHVftgEKVAVKVIDKTKldtlaTGHLFQ 63   

                   EakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldy
                   E + Mk +  +HpNiV+L+ v+ ++         l++++E+ +gGd  dy
    KIAA0096    64 EVRCMKLV--QHPNIVRLYEVIDTQ-------TKLYLILELGDGGDMFDY 104  

                   LrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenk.v
                   + k+++ l+ +   ++  QI    +Y ++ ++vHRDL   N+   e+++ 
    KIAA0096   105 IMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFEKQgL 154  

                   vKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkdg
                   vK +DFG s +   +      k+  ++    +g     +   APE l   
    KIAA0096   155 VKLTDFGFSNKFQPG------KKLTTS----CGS----LAYSAPEILLGD 190  

                   kFt.skSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyRl
                   ++  ++ D+WS GV L+ ++  G++P  +      +++e l  +++ ++ 
    KIAA0096   191 EYDaPAVDIWSLGVILF-MLVCGQPPFQE-----ANDSETLTMIMDCKYT 234  

                   pkPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..verl<-*
                    + +          ++e  dl+++  ++dP+ R + +e++++  l   
    KIAA0096   235 VPSHV---------SKECKDLITRMLQRDPKRRASLEEIenHPWL    270  

SM00220: domain 1 of 1, from 17 to 270: score 366.2, E = 2.1e-105
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik.........erilr
                      Y+l k+lG+G F++V+lar++ tg++vA+Kvi++++ ++  + ++ +
    KIAA0096    17    YDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDktkldtlatGHLFQ 63   

                   EikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgrr
                   E++++k  +HPNIV+Ly+v+++++klyl++E+ +G  Gd+fd++ k+  +
    KIAA0096    64 EVRCMKLvQHPNIVRLYEVIDTqTKLYLILELGDG--GDMFDYIMKHEEG 111  

                   glrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds...hvK
                        l+E+ a++yf+Qi+ a+ Y+H+++++HRDLKPeN+ + ++++ vK
    KIAA0096   112 -----LNEdLAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFEkqgLVK 156  

                   laDFGlArql......ttfvGTpeYmAPEvl...gYgkpavDiWSlGcil
                   l+DFG++ +++++++ tt +G++ Y APE+l ++ Y+ pavDiWSlG+il
    KIAA0096   157 LTDFGFSNKFqpgkklTTSCGSLAYSAPEILlgdEYDAPAVDIWSLGVIL 206  

                   yElltGkpPFp..qldlifkkig..........SpeakdLikklLvkdPe
                   + l++G+pPF++ ++ +++ +i++ +++ +++ S+e+kdLi ++L++dP+
    KIAA0096   207 FMLVCGQPPFQeaNDSETLTMIMdckytvpshvSKECKDLITRMLQRDPK 256  

                   kRlta.eaLedeldikaHPff<-*
                   +R + +e+ +       HP++   
    KIAA0096   257 RRASLeEIEN-------HPWL    270  

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