hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-17153951/chunk_1/iprscan-20080501-17153951.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0096 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 330.4 2.8e-96 1 PF00069.15.fs Protein kinase domain 328.5 1e-95 1 PF07714.7.fs Protein tyrosine kinase 67.3 2e-19 2 PF07714.7.ls Protein tyrosine kinase 71.7 2.2e-18 1 PF00627.21.fs UBA/TS-N domain 19.3 0.0001 1 PF00627.21.ls UBA/TS-N domain 21.3 0.0033 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.fs 1/1 17 270 .. 1 287 [] 328.5 1e-95 PF07714.7.fs 1/2 17 141 .. 1 139 [. 67.0 2.4e-19 PF00069.15.ls 1/1 17 270 .. 1 287 [] 330.4 2.8e-96 PF07714.7.ls 1/1 17 270 .. 1 272 [] 71.7 2.2e-18 PF00627.21.ls 1/1 295 335 .. 1 41 [] 21.3 0.0033 PF00627.21.fs 1/1 295 335 .. 1 41 [] 19.3 0.0001 Alignments of top-scoring domains: PF00069.15.fs: domain 1 of 1, from 17 to 270: score 328.5, E = 1e-95 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr y l ++lG+G f++V++a+h+ tg++VAvK+i+k k + +++ KIAA0096 17 YDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLATGHLFQ 63 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E++ +k ++HpNIvrl++v + ++lyl+lE+ +gG d fdy++ KIAA0096 64 --EVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGG----DMFDYIM- 106 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv + + +l ed akk++ Qi+ ++ Y+H+ ++HRDLKPeN+ + ++ KIAA0096 107 -KHEEGL--NEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFEKQG 153 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD + +K++DFG++ k +++ +ltt +G++ Y APE+llg++++ ++vD KIAA0096 154 L---VKLTDFGFSNK--FqPGKkLTTSCGSLAYSAPEILLGDEYDAPAVD 198 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi +WSlGvil+ l++G+pPF+++ ++ + + +i+ +++ +s + KIAA0096 199 IWSLGVILFMLVCGQPPFQEA-----NDSETLTMIMDCKYTVPSHVS--- 240 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* +e+kdLi+++L++DP++R + eei +HPw+ KIAA0096 241 ------------KECKDLITRMLQRDPKRRASLEEIENHPWL 270 PF07714.7.fs: domain 1 of 2, from 17 to 141: score 67.0, E = 2.4e-19 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei l+k+LG+G+F +V +++ t+ kVAVK+++k + + + KIAA0096 17 YDLDKTLGRGHFAVVKLARHV----FTGEKVAVKVIdKT-KLDTLA- 57 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd +++E++ Mk +HpNiVrL+ v+ + ly+++E+ gGd KIAA0096 58 -TGHLFQEVRCMKLV-QHPNIVRLYEVIDT-QTK----LYLILELGDGGD 100 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDL<-* + d+ kh ++ L+ ++ +Qi + +Y + + vHRDL KIAA0096 101 MFDYIMKH--EEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDL 141 PF00069.15.ls: domain 1 of 1, from 17 to 270: score 330.4, E = 2.8e-96 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr y l ++lG+G f++V++a+h+ tg++VAvK+i+k k + +++ KIAA0096 17 YDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLATGHLFQ 63 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse E++ +k ++HpNIvrl++v + ++lyl+lE+ +gG d fdy++ KIAA0096 64 --EVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGG----DMFDYIM- 106 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv + + +l ed akk++ Qi+ ++ Y+H+ ++HRDLKPeN+ + ++ KIAA0096 107 -KHEEGL--NEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVVFFEKQG 153 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD + +K++DFG++ k +++ +ltt +G++ Y APE+llg++++ ++vD KIAA0096 154 L---VKLTDFGFSNK--FqPGKkLTTSCGSLAYSAPEILLGDEYDAPAVD 198 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi +WSlGvil+ l++G+pPF+++ ++ + + +i+ +++ +s + KIAA0096 199 IWSLGVILFMLVCGQPPFQEA-----NDSETLTMIMDCKYTVPSHVS--- 240 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* +e+kdLi+++L++DP++R + eei +HPw+ KIAA0096 241 ------------KECKDLITRMLQRDPKRRASLEEIENHPWL 270 PF07714.7.ls: domain 1 of 1, from 17 to 270: score 71.7, E = 2.2e-18 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei l+k+LG+G+F +V +++ t+ kVAVK+++k + + + KIAA0096 17 YDLDKTLGRGHFAVVKLARHV----FTGEKVAVKVIdKT-KLDTLA- 57 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGd +++E++ Mk +HpNiVrL+ v+ + ly+++E+ gGd KIAA0096 58 -TGHLFQEVRCMKLV-QHPNIVRLYEVIDT-QTK----LYLILELGDGGD 100 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV + d+ kh ++ L+ ++ +Qi + +Y + + vHRDL N+ KIAA0096 101 MFDYIMKH--EEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDLKPENVVF 148 senl.vVKIsDFGLaRdiynddyYvrkkgggklPvkWmAPEslkygkFt. e+ + VK +DFG + ++ +++ APE l ++ KIAA0096 149 FEKQgLVKLTDFGFSNKFQPGKKL-TTSC---GSLAYSAPEILLGDEYDa 194 skSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyed.GyRLprPenC + D+WS GV L+ ++ G++P +++ ++e+l ++ +d y p KIAA0096 195 PAVDIWSLGVILFMLVC-GQPP-FQEANDSETLTMI-MDcKYTVPSHV-- 239 PdelYdlMlqCWaedPedRPtFsel..veeL<-* ++e dl+++ ++dP++R + +e++++ L KIAA0096 240 SKECKDLITRMLQRDPKRRASLEEIenHPWL 270 PF00627.21.ls: domain 1 of 1, from 295 to 335: score 21.3, E = 0.0033 *->ideeavkqLreMTGf.dreeakkALeatngnverAvewLleh<-* ++++++++++ dr+++++ALe + +n +A+++Ll + KIAA0096 295 EHNSIIQRMVLG-DIaDRDAIVEALETNRYNHITATYFLLAE 335 PF00627.21.fs: domain 1 of 1, from 295 to 335: score 19.3, E = 0.0001 *->ideeavkqLreMTGf.dreeakkALeatngnverAvewLleh<-* ++++++++++ dr+++++ALe + +n +A+++Ll + KIAA0096 295 EHNSIIQRMVLG-DIaDRDAIVEALETNRYNHITATYFLLAE 335 //