hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-17072546/chunk_1/iprscan-20080501-17072546.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0091 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00082.12.fs Subtilase family 94.9 6.2e-27 1 PF00082.12.ls Subtilase family 96.6 6.7e-26 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00082.12.fs 1/1 198 470 .. 1 352 [] 94.9 6.2e-27 PF00082.12.ls 1/1 198 470 .. 1 352 [] 96.6 6.7e-26 Alignments of top-scoring domains: PF00082.12.fs: domain 1 of 1, from 198 to 470: score 94.9, E = 6.2e-27 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx *->yggsdinapaaWdrgytGkGvvvaViDTGidtnHpDLkgnyiggkki + ++a+ +W+ gytG +v vaV DTG+ +Hp +k n+ k KIAA0091 198 QVAQTLQADVLWQMGYTGANVRVAVFDTGLSEKHPHFK-NV----KE 239 RF xxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx tsn.dpegsyDfndndsnpnDPgPryddsddngHGTHVAGtiAAvgnNsi +n + e D d+ gHGT VAG iA+ ++ KIAA0091 240 RTNwTNERTLD------------------DGLGHGTFVAGVIASMRE--- 268 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx gvvGVApgAkllavrvLdgpngsgtseleaasywaasaviagiewaandn G Ap+A+l + rv+ + ++s+t s+ +++++a+ KIAA0091 269 -CQGFAPDAELHIFRVFTNNQVSYT-----------SWFLDAFNYAI-LK 305 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx gadvinmSlGggfpgdsGstsdgpgdlakkAllegAvnyArvnkGsifVa ++dv n S Gg + ++d + +++ v + +++++i V KIAA0091 306 KIDVLNLSIGG------PDFMD-------HPFVDK-VWEL-TANNVIMVS 340 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx AAGNeGsdasdscgcdgnykfrslvkKvvsPAnsiytnvIaVGAtdqn.. A GN+G+ +++ ++ PA vI VG++d++++ KIAA0091 341 AIGNDGPL-YGTL--NN-------------PADQM--DVIGVGGIDFEdn 372 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ..............fssnsglavdisAPGdsevnIlSTdlqdsgaliynn + ++++ ++ + + +++di+ G + + + KIAA0091 373 iarfssrgmttwelPGGYGRMKPDIVTYG---AGVRGS---------GVK 410 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ggyaslsGTSMAaPhvAGvaALllsanspnltWrdvqylsvlsesaaelr gg lsGTS A+P vAG+++Ll s q + + ++a ++ KIAA0091 411 GGCRALSGTSVASPVVAGAVTLLVSTV---------QKRELV--NPASMK 449 RF xxxxxxxxxxxxxxxxxxxxxx aalentatslggagisnlfGyG<-* +al+ a l g + +G+G KIAA0091 450 QALIASARRLPGVNM-FEQGHG 470 PF00082.12.ls: domain 1 of 1, from 198 to 470: score 96.6, E = 6.7e-26 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx *->yggsdinapaaWdrgytGkGvvvaViDTGidtnHpDLkgnyiggkki + ++a+ +W+ gytG +v vaV DTG+ +Hp +k n+ k KIAA0091 198 QVAQTLQADVLWQMGYTGANVRVAVFDTGLSEKHPHFK-NV----KE 239 RF xxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx tsn.dpegsyDfndndsnpnDPgPryddsddngHGTHVAGtiAAvgnNsi +n + e D d+ gHGT VAG iA+ ++ KIAA0091 240 RTNwTNERTLD------------------DGLGHGTFVAGVIASMRE--- 268 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx gvvGVApgAkllavrvLdgpngsgtseleaasywaasaviagiewaandn G Ap+A+l + rv+ + ++s+t s+ +++++a+ KIAA0091 269 -CQGFAPDAELHIFRVFTNNQVSYT-----------SWFLDAFNYAI-LK 305 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx gadvinmSlGggfpgdsGstsdgpgdlakkAllegAvnyArvnkGsifVa ++dv n S Gg + ++d + +++ v + +++++i V KIAA0091 306 KIDVLNLSIGG------PDFMD-------HPFVDK-VWEL-TANNVIMVS 340 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx AAGNeGsdasdscgcdgnykfrslvkKvvsPAnsiytnvIaVGAtdqn.. A GN+G+ +++ ++ PA vI VG++d++++ KIAA0091 341 AIGNDGPL-YGTL--NN-------------PADQM--DVIGVGGIDFEdn 372 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ..............fssnsglavdisAPGdsevnIlSTdlqdsgaliynn + ++++ ++ + + +++di+ G + + + KIAA0091 373 iarfssrgmttwelPGGYGRMKPDIVTYG---AGVRGS---------GVK 410 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ggyaslsGTSMAaPhvAGvaALllsanspnltWrdvqylsvlsesaaelr gg lsGTS A+P vAG+++Ll s q + + ++a ++ KIAA0091 411 GGCRALSGTSVASPVVAGAVTLLVSTV---------QKRELV--NPASMK 449 RF xxxxxxxxxxxxxxxxxxxxxx aalentatslggagisnlfGyG<-* +al+ a l g + +G+G KIAA0091 450 QALIASARRLPGVNM-FEQGHG 470 //