hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16272647/chunk_1/iprscan-20080501-16272647.nocrc
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Query sequence: KIAA0067
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00468                                                 157.0    1.9e-42   1
SM00317                                                 152.0      6e-41   1
SM00391                                                 125.1    7.9e-33   1
SM00333                                                  89.3    4.7e-22   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00333    1/2     265   327 ..     1    60 []    41.7  9.5e-08
SM00333    2/2     355   410 ..     1    60 []    47.5  1.7e-09
SM00391    1/1     606   681 ..     1    87 []   125.1  7.9e-33
SM00468    1/1     688   795 ..     1   124 []   157.0  1.9e-42
SM00317    1/1     812  1281 ..     1   114 []   152.0    6e-41

Alignments of top-scoring domains:
SM00333: domain 1 of 2, from 265 to 327: score 41.7, E = 9.5e-08
                   *->pkfkvGdlvaarwse.DgewYrArIikvdse..nqlyeVffiDyGne
                       k+ vG  v+a+++++++ w  A I++ +++ +n+l +++f+D+G+ 
    KIAA0067   265    DKLYVGSRVVAKYKDgNQVWLYAGIVAETPNvkNKLRFLIFFDDGYA 311  

                   evvplsdlrqlpekfa<-*
                   ++v  s l++++++++   
    KIAA0067   312 SYVTQSELYPICRPLK    327  

SM00333: domain 2 of 2, from 355 to 410: score 47.5, E = 1.7e-09
                   *->pkfkvGdlvaarwseDgewYrArIikvdsenqlyeVffiDyGneevv
                      + +k G+l+++ w  +g+w++ r+++vd+  +l++++f+D+  +e++
    KIAA0067   355    VLLKSGQLIKTEW--EGTWWKSRVEEVDG--SLVRILFLDDKRCEWI 397  

                   plsdlrqlpekfa<-*
                   ++++ r++p +++   
    KIAA0067   398 YRGSTRLEPMFSM    410  

SM00391: domain 1 of 1, from 606 to 681: score 125.1, E = 7.9e-33
                   *->edelrlPaLppGWrRetvqRksgKKssagkgDVyYisPcGkkLRsks
                      +++l +P L++++rR+t++R+++   ++++++V+Y++PcG++LR+++
    KIAA0067   606    KNPLLVP-LLYDFRRMTARRRVN---RKMGFHVIYKTPCGLCLRTMQ 648  

                   ElarYLhkngdlslaledPLRPEYlFdFnarvpvgpkitp<-*
                   E++rYL+++g+++l+le       +F+++++v+v++k++p   
    KIAA0067   649 EIERYLFETGCDFLFLE-------MFCLDPYVLVDRKFQP    681  

SM00468: domain 1 of 1, from 688 to 795: score 157.0, E = 1.9e-42
                   *->llDisnGkEnvPvplVeNevDedppplPpdFeYiserivgqgvvdIl
                      +lDi++GkE+vP ++V Ne+D++pp   p+  Y++eri+g+gv+   
    KIAA0067   688    ILDITYGKEDVPLSCV-NEIDTTPP---PQVAYSKERIPGKGVF--- 727  

                   idrspsplsgCsCvdledCsssnmskCeCarknieggefaYkelrldkee
                   i+++p++l+gC+C+d  +C++++  kC+C++++i+++ ++++++++++++
    KIAA0067   728 INTGPEFLVGCDCKD--GCRDKS--KCACHQLTIQATACTPGGQINPNSG 773  

                   ekkverlngglllkakpvIYECNsrCs<-*
                        +++++l+ + ++++YECN+rC+   
    KIAA0067   774 -----YQYKRLEECLPTGVYECNKRCK    795  

SM00317: domain 1 of 1, from 812 to 1281: score 152.0, E = 6e-41
                   *->aklevfkskgkGwGlratedIpkGefIleyvGeii............
                      ++l++fk+ +kGwG+r+++dI+kG+f++ y+G i++++  ++++ + 
    KIAA0067   812    VRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILtddfadkeglem 858  

                   ..................................................
                   +++   + ++ ++ ++ +++ +++ + ++++++ + ++++++++++++++
    KIAA0067   859 gdeyfanldhiesvenfkegyesdapcssdssgvdlkdqedgnsgtedpe 908  

                   ..................................................
                   ++++++++++  ++++ ++++  ++  ++++++++++++ ++++++++++
    KIAA0067   909 esnddssddnfckdedfstssvwrsyatrrqtrgqkenglsettskdshp 958  

                   ..................................................
                   ++ ++++ + +++ + ++ ++++++++++++  +  + ++ ++++  +++
    KIAA0067   959 pdlgpphipvppsipvggcnppsseetpknkvaswlscnsvseggfadsd 1008 

                   ..................................................
                   ++++ +++++++++ ++++ + ++ ++++ + +++++ ++ +++++++++
    KIAA0067  1009 shssfktneggegraggsrmeaekastsglgikdegdikqakkedtddrn 1058 

                   ..................................................
                   + +  ++++++ + ++++ ++++ ++++++++ +++++   + ++++++ 
    KIAA0067  1059 kmsvvtessrnygynpspvkpeglrrppsktsmhqsrrlmasaqsnpddv 1108 

                   ..................................................
                    + +++++++++++++++++ ++++ +  ++++ ++ ++++++++ ++++
    KIAA0067  1109 ltlssstesegesgtsrkptagqtsatavdsddiqtissgsegddfedkk 1158 

                   ..................................................
                   + +++ +++   +++++   +++++   ++++  + +++++ + ++++++
    KIAA0067  1159 nmtgpmkrqvavkstrgfalksthgiaikstnmasvdkgesapvrkntrq 1208 

                   fylfd....ciDatranggkGniarfiNHSCePNcelifvevdgfdprga
                   fy  +++   iDa+      Gn++r++NHSC+PN+ +++v+vd++d+r  
    KIAA0067  1209 FYDGEescyIIDAKL----EGNLGRYLNHSCSPNLFVQNVFVDTHDLR-- 1252 

                   sdsadprivifAlrdIkpGEELtidYgddyege<-*
                       +p++++fA ++I++G+ELt+dY+++ ++    
    KIAA0067  1253 ----FPWVAFFASKRIRAGTELTWDYNYEVGSV    1281 

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