hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16222440/chunk_1/iprscan-20080501-16222440.nocrc
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Query sequence: KIAA0064
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00312                                                  96.0    4.3e-24   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00312    1/1      26   130 ..     1   142 []    96.0  4.3e-24

Alignments of top-scoring domains:
SM00312: domain 1 of 1, from 26 to 130: score 96.0, E = 4.3e-24
                   *->dniai.vavveeetsgkkrgdgkhyyyvieietstnedveewtvyRR
                      ++++i+ ++++  +s      g ++y++++i++++ +     +++ R
    KIAA0064    26    MHFSIpETESRSGDS------GGSAYVAYNIHVNGVL-----HCRVR 61   

                   YsdFleLhskLlkkfpqekrrriiPplPekkllgryreraekesmkvkks
                   Ys+ l Lh++L+k+++      ++P +P+kkl++ +              
    KIAA0064    62 YSQLLGLHEQLRKEYG----ANVLPAFPPKKLFSLT-------------- 93   

                   lnnfseefiekRrrgLerYLqkllnhPelinhyrvsevvleFLess<-*
                        ++ +e+Rr++Le+Y+q++ ++P+l +    se + +FL      
    KIAA0064    94 -----PAEVEQRREQLEKYMQAVRQDPLLGS----SETFNSFLRRA    130  

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