hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16103587/chunk_1/iprscan-20080501-16103587.nocrc
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Query sequence: KIAA0057
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00724                                                 208.8    4.9e-58   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00724    1/1     126   335 ..     1   230 []   208.8  4.9e-58

Alignments of top-scoring domains:
SM00724: domain 1 of 1, from 126 to 335: score 208.8, E = 4.9e-58
                   *->kkfkEsswrlvsylhsvvaglyvlyslpswfsdpkscwegpsypiqg
                      +kf+Es++++v+++ sv++++yv++ +  ++++p+s+we+  yp+  
    KIAA0057   126    SKFNESGQLVVFHFTSVIWCFYVVVTEG-YLTNPRSLWED--YPHVH 169  

                   msplakfyylfslGYfiydlvalllfqdlkrkDefwemlvHHivtlllis
                   +++++kf+yl++l+Y+++ l++l+ fq++++++ ++ +l +++++l++i+
    KIAA0057   170 LPFQVKFFYLCQLAYWLHALPELY-FQKVRKEE-IPRQLQYICLYLVHIA 217  

                   lsyvlnftrvglllllllhElSdpfLelrkllkyagkkkkseyrlfslly
                   ++y+ln++r+gl+ llll + ++++++ ++l+++a+           + +
    KIAA0057   218 GAYLLNLSRLGLI-LLLLQYSTEFLFHTARLFYFAD-----------ENN 255  

                   dvnfilfavvFfvfRlilfpfliltvtvhyaqvlsgpldlskvakgvfpp
                    ++f ++a+vF v+Rl+++++ +l  ++++a+ +++++d++k   g+f++
    KIAA0057   256 EKLFSAWAAVFGVTRLFILTLAVLAIGFGLARMENQAFDPEK---GNFNT 302  

                   llyllflallliLqllniyWfflilrmarklls<-*
                   l+ +l+++ll+++++ +++W f++ ++ ++++    
    KIAA0057   303 LFCRLCVLLLVCAAQAWLMWRFIHSQLRHWREY    335  

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