hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15565426/chunk_1/iprscan-20080501-15565426.nocrc
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Query sequence: KIAA0049
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00291                                                  65.4    7.2e-15   1
SM00666                                                  64.7    1.2e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00666    1/1       7    88 ..     1    95 []    64.7  1.2e-14
SM00291    1/1     214   259 ..     1    46 []    65.4  7.2e-15

Alignments of top-scoring domains:
SM00666: domain 1 of 1, from 7 to 88: score 64.7, E = 1.2e-14
                   *->tvdvKlrYvggetrrlsvpr..disfedLrskvakrfgldneqpftL
                      +v++ +++ ++e++ + v+ +++++++d  ++v+  f+l    ++++
    KIAA0049     7    QVTLNVTF-KNEIQSFLVSDpeNTTWADIEAMVKVSFDLN---TIQI 49   

                   KYqLPDeDgDalVsltsDeDLeeaieeydslesskkSsgsktlrllvfvs
                   KY+  De+++  Vs++s+ ++eea++++ +        + + l+++v++ 
    KIAA0049    50 KYL--DEENE-EVSINSQGEYEEALKMAVK--------QGNQLQMQVHEG 88   

                   <-*
                      
    KIAA0049     -     -    

SM00291: domain 1 of 1, from 214 to 259: score 65.4, E = 7.2e-15
                   *->vhhsvsCdgCgkepivgvRYkClvCpDYDLCesCfakG.ghhgeHam
                      ++++ +C++C++ +ivgvRY+C++Cp Y++Ce+C+a + gh ++H +
    KIAA0049   214    FSWHIACNNCQR-RIVGVRYQCSLCPSYNICEDCEAGPyGHDTNHVL 259  

                   <-*
                      
    KIAA0049     -     -    

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