hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15364448/chunk_1/iprscan-20080501-15364448.nocrc
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Query sequence: KIAA0037
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00044                                                 394.8   5.1e-114   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00044    1/2     232   440 ..     1   231 []   230.5  1.4e-64
SM00044    2/2     848  1060 ..     1   231 []   164.2  1.3e-44

Alignments of top-scoring domains:
SM00044: domain 1 of 2, from 232 to 440: score 230.5, E = 1.4e-64
                   *->eekkktdrLLyqlLPasvAeslkegr..................epv
                      +ek++ + LL ++LPa++ + +k    ++ +++++++  ++++ ++ 
    KIAA0037   232    IEKRQQENLLLSVLPAHISMGMKLAIierlkehgdrrcmpdnnfHSL 278  

                   paesydsVTilFsDIvgFTslcsastPeqvvtlLndlysrFDriidrhgg
                   + +++++V+il++DIvgFT l+s ++P ++v +Ln+l+ +FD+i + +  
    KIAA0037   279 YVKRHQNVSILYADIVGFTQLASDCSPKELVVVLNELFGKFDQIAKANE- 327  

                   srvvvYKVeTiGDaYMVvsGlPeeaetsaesklkddglteawcfavqhae
                       +  ++ +GD+Y++vsGlP +                       ha+
    KIAA0037   328 ----CMRIKILGDCYYCVSGLPVSLP--------------------THAR 353  

                   liadeaLdmveslktvkvphrkgelpgeglrvRiGiHtGpVvaGVvGlrm
                   +++ ++Ldm++++k+v         +g ++++R+GiH+G V++GV+Glr+
    KIAA0037   354 NCVKMGLDMCQAIKQVREA------TGVDINMRVGIHSGNVLCGVIGLRK 397  

                   pRYclFGdTVNlASRmEStgdpgqIqvSeetyslLqlgqaerrekggfef
                   + Y+++ ++V lA+RmE++g+pg+++++e+t ++L         +  +e+
    KIAA0037   398 WQYDVWSHDVSLANRMEAAGVPGRVHITEATLKHL---------DKAYEV 438  

                   ee<-*
                   e    
    KIAA0037   439 ED    440  

SM00044: domain 2 of 2, from 848 to 1060: score 164.2, E = 1.3e-44
                   *->eekkktdrLLyqlLPasvAeslkegr..epvpaesydsVTilFsDIv
                       +++ +  LL ++LPa+vA +    + +e  +++syd+V ++F+ ++
    KIAA0037   848    TMENVNRLLLENVLPAHVAAHFIGDKlnEDWYHQSYDCVCVMFASVP 894  

                   gFTslc....sastPeqvvtlLndlysrFDriidrhggsrv.vvYKVeTi
                   +F  ++++ +   + ++  +lLn++   FD+++++ +    + v+K++Ti
    KIAA0037   895 DFKVFYtecdVNKEGLECLRLLNEIIADFDELLLKPK---FsGVEKIKTI 941  

                   GDaYMVvsGlPeeaetsaesklkddglteawcfavqhaeliadeaLdmve
                   G +YM++ Gl  + ++           +  +++ ++h+  +++++   ++
    KIAA0037   942 GSTYMAAAGLSVASGH----------ENQELERQHAHIGVMVEFSIALMS 981  

                   slktvkvphrkgelpgeglrvRiGiHtGpVvaGVvGlrmpRYclFGdTVN
                    l++ +++h+     ++ +r+R+Gi+ GpV aGV+G+r+p Y+++G+TVN
    KIAA0037   982 KLDG-INRHS-----FNSFRLRVGINHGPVIAGVIGARKPQYDIWGNTVN 1025 

                   lASRmEStgdpgqIqvSeetyslLqlgqaerrekggfefee<-*
                   +ASRmEStg+ g+Iqv+eet  +L      ++  +  e+ +   
    KIAA0037  1026 VASRMESTGELGKIQVTEETCTIL------QGLGYSCECRG    1060 

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